• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种用于随机多变量时间序列的多窗、因果分解:应用于高频钙成像数据

A Multitaper, Causal Decomposition for Stochastic, Multivariate Time Series: Application to High-Frequency Calcium Imaging Data.

作者信息

Sornborger Andrew T, Lauderdale James D

机构信息

Department of Mathematics, University of California, Davis, CA.

Department of Cellular Biology, University of Georgia, Athens, GA.

出版信息

Conf Rec Asilomar Conf Signals Syst Comput. 2016 Nov;2016:1056-1060. doi: 10.1109/ACSSC.2016.7869531. Epub 2017 Mar 6.

DOI:10.1109/ACSSC.2016.7869531
PMID:28649174
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5479311/
Abstract

Neural data analysis has increasingly incorporated causal information to study circuit connectivity. Dimensional reduction forms the basis of most analyses of large multivariate time series. Here, we present a new, multitaper-based decomposition for stochastic, multivariate time series that acts on the covariance of the time series at all lags, (), as opposed to standard methods that decompose the time series, (), using only information at zero-lag. In both simulated and neural imaging examples, we demonstrate that methods that neglect the full causal structure may be discarding important dynamical information in a time series.

摘要

神经数据分析越来越多地纳入因果信息来研究电路连接性。降维构成了大多数大型多元时间序列分析的基础。在这里,我们提出了一种基于多 taper 的新分解方法,用于随机多元时间序列,该方法作用于所有滞后时间序列的协方差(),这与仅使用零滞后信息来分解时间序列()的标准方法相反。在模拟和神经成像示例中,我们都证明了忽略完整因果结构的方法可能会丢弃时间序列中的重要动态信息。

相似文献

1
A Multitaper, Causal Decomposition for Stochastic, Multivariate Time Series: Application to High-Frequency Calcium Imaging Data.一种用于随机多变量时间序列的多窗、因果分解:应用于高频钙成像数据
Conf Rec Asilomar Conf Signals Syst Comput. 2016 Nov;2016:1056-1060. doi: 10.1109/ACSSC.2016.7869531. Epub 2017 Mar 6.
2
Benchmarking nonparametric Granger causality: Robustness against downsampling and influence of spectral decomposition parameters.非参数格兰杰因果关系的基准测试:对降采样的稳健性和谱分解参数的影响。
Neuroimage. 2018 Dec;183:478-494. doi: 10.1016/j.neuroimage.2018.07.046. Epub 2018 Jul 20.
3
The Effect of a Hidden Source on the Estimation of Connectivity Networks from Multivariate Time Series.隐藏源对多元时间序列连通性网络估计的影响。
Entropy (Basel). 2021 Feb 8;23(2):208. doi: 10.3390/e23020208.
4
Spectral Estimation Using Multitaper Whittle Methods with a Lasso Penalty.使用带套索惩罚的多窗Whittle方法进行谱估计。
IEEE Trans Signal Process. 2019 Oct 1;67(19):4992-5003. doi: 10.1109/tsp.2019.2932879. Epub 2019 Aug 2.
5
Causal inference in neuronal time-series using adaptive decomposition.使用自适应分解对神经元时间序列进行因果推断。
J Neurosci Methods. 2015 Apr 30;245:73-90. doi: 10.1016/j.jneumeth.2015.02.013. Epub 2015 Feb 24.
6
Multitaper Analysis of Semi-Stationary Spectra from Multivariate Neuronal Spiking Observations.基于多变量神经元放电观测的半平稳谱的多窗谱分析
IEEE Trans Signal Process. 2020;68:4382-4396. doi: 10.1109/tsp.2020.3010197. Epub 2020 Jul 17.
7
Frequency decomposition of conditional Granger causality and application to multivariate neural field potential data.条件格兰杰因果关系的频率分解及其在多元神经场电位数据中的应用。
J Neurosci Methods. 2006 Jan 30;150(2):228-37. doi: 10.1016/j.jneumeth.2005.06.011. Epub 2005 Aug 15.
8
Detectability of Granger causality for subsampled continuous-time neurophysiological processes.对下采样连续时间神经生理过程的格兰杰因果关系的可检测性。
J Neurosci Methods. 2017 Jan 1;275:93-121. doi: 10.1016/j.jneumeth.2016.10.016. Epub 2016 Nov 5.
9
State-space multitaper time-frequency analysis.状态空间多谱勒时频分析。
Proc Natl Acad Sci U S A. 2018 Jan 2;115(1):E5-E14. doi: 10.1073/pnas.1702877115. Epub 2017 Dec 18.
10
Assessing frequency domain causality in cardiovascular time series with instantaneous interactions.通过瞬时相互作用评估心血管时间序列中的频域因果关系。
Methods Inf Med. 2010;49(5):453-7. doi: 10.3414/ME09-02-0030. Epub 2010 Sep 22.

本文引用的文献

1
Automated quantification of neuronal networks and single-cell calcium dynamics using calcium imaging.使用钙成像技术对神经网络和单细胞钙动力学进行自动定量分析。
J Neurosci Methods. 2015 Mar 30;243:26-38. doi: 10.1016/j.jneumeth.2015.01.020. Epub 2015 Jan 25.
2
A multivariate, multitaper approach to detecting and estimating harmonic response in cortical optical imaging data.一种用于检测和估计皮质光学成像数据中谐波响应的多元、多峰方法。
J Neurosci Methods. 2012 Jan 15;203(1):254-63. doi: 10.1016/j.jneumeth.2011.09.018. Epub 2011 Sep 29.
3
Mapping Functional Connectivity between Neuronal Ensembles with Larval Zebrafish Transgenic for a Ratiometric Calcium Indicator.利用比率型钙指示剂对幼鱼进行转基因标记,绘制神经元集合之间的功能连接图谱。
Front Neural Circuits. 2011 Feb 22;5:2. doi: 10.3389/fncir.2011.00002. eCollection 2011.
4
A multiscale analysis of the temporal characteristics of resting-state fMRI data.静息态 fMRI 数据的时间特征的多尺度分析。
J Neurosci Methods. 2010 Nov 30;193(2):334-42. doi: 10.1016/j.jneumeth.2010.08.021. Epub 2010 Sep 9.
5
Estimating weak ratiometric signals in imaging data. II. Meta-analysis with multiple, dual-channel datasets.
J Opt Soc Am A Opt Image Sci Vis. 2008 Sep;25(9):2185-94. doi: 10.1364/josaa.25.002185.
6
Independent component analysis: algorithms and applications.独立成分分析:算法与应用
Neural Netw. 2000 May-Jun;13(4-5):411-30. doi: 10.1016/s0893-6080(00)00026-5.
7
Robust smoothness estimation in statistical parametric maps using standardized residuals from the general linear model.使用一般线性模型的标准化残差在统计参数图中进行稳健的平滑度估计。
Neuroimage. 1999 Dec;10(6):756-66. doi: 10.1006/nimg.1999.0508.
8
Analysis of fMRI data by blind separation into independent spatial components.通过盲分离为独立空间成分对功能磁共振成像数据进行分析。
Hum Brain Mapp. 1998;6(3):160-88. doi: 10.1002/(SICI)1097-0193(1998)6:3<160::AID-HBM5>3.0.CO;2-1.
9
Representation of spatial frequency and orientation in the visual cortex.视觉皮层中空间频率和方向的表征。
Proc Natl Acad Sci U S A. 1998 Jul 7;95(14):8334-8. doi: 10.1073/pnas.95.14.8334.