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关于β多样性、方差、均匀度和不相似性。

Of beta diversity, variance, evenness, and dissimilarity.

作者信息

Ricotta Carlo

机构信息

Department of Environmental Biology University of Rome 'La Sapienza' Rome Italy.

出版信息

Ecol Evol. 2017 May 26;7(13):4835-4843. doi: 10.1002/ece3.2980. eCollection 2017 Jul.

DOI:10.1002/ece3.2980
PMID:28690812
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5496569/
Abstract

The amount of variation in species composition among sampling units or beta diversity has become a primary tool for connecting the spatial structure of species assemblages to ecological processes. Many different measures of beta diversity have been developed. Among them, the total variance in the community composition matrix has been proposed as a single-number estimate of beta diversity. In this study, I first show that this measure summarizes the compositional variation among sampling units after nonlinear transformation of species abundances. Therefore, it is not always adequate for estimating beta diversity. Next, I propose an alternative approach for calculating beta diversity in which variance is substituted by a weighted measure of concentration (i.e., an inverse measure of evenness). The relationship between this new measure of beta diversity and so-called multiple-site dissimilarity measures is also discussed.

摘要

采样单元间物种组成的变化量即β多样性,已成为将物种组合的空间结构与生态过程相联系的主要工具。人们已开发出许多不同的β多样性测度方法。其中,群落组成矩阵的总方差已被提议作为β多样性的单一数值估计。在本研究中,我首先表明,该测度在对物种丰度进行非线性变换后,总结了采样单元间的组成变化。因此,它并非总是足以估计β多样性。接下来,我提出一种计算β多样性的替代方法,其中方差被浓度的加权测度(即均匀度的倒数测度)所取代。还讨论了这种新的β多样性测度与所谓的多地点差异测度之间的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4f/5496569/e2218d4bf963/ECE3-7-4835-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4f/5496569/e2218d4bf963/ECE3-7-4835-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4f/5496569/e2218d4bf963/ECE3-7-4835-g001.jpg

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2
Evenness indices once again: critical analysis of properties.再谈均匀度指数:性质的批判性分析
Springerplus. 2015 May 16;4:232. doi: 10.1186/s40064-015-0944-4. eCollection 2015.
3
Beta diversity as the variance of community data: dissimilarity coefficients and partitioning.β 多样性作为群落数据的变异性:不相似系数和划分。
塞内加尔达喀尔街头和露天市场销售的新鲜水果和蔬菜中的细菌群落。
BMC Microbiol. 2024 Nov 13;24(1):471. doi: 10.1186/s12866-024-03622-9.
4
Scale-dependent effects of herbivory on moss communities in Arctic wetlands: A 25-year experiment.食草作用对北极湿地苔藓群落的尺度依赖性影响:一项为期25年的实验。
Ecol Evol. 2024 Apr 25;14(4):e11272. doi: 10.1002/ece3.11272. eCollection 2024 Apr.
5
Assessment of bacterial and fungal populations in urine from clinically healthy dogs using next-generation sequencing.使用下一代测序技术评估临床健康犬尿液中的细菌和真菌种群。
J Vet Intern Med. 2021 May;35(3):1416-1426. doi: 10.1111/jvim.16104. Epub 2021 Mar 19.
6
Building a richer understanding of diversity through causally consistent evenness measures.通过因果一致的均匀度度量加深对多样性的理解。
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7
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Parasitol Res. 2020 Dec;119(12):4005-4015. doi: 10.1007/s00436-020-06906-x. Epub 2020 Oct 12.
8
Taxonomic and functional anuran beta diversity of a subtropical metacommunity respond differentially to environmental and spatial predictors.亚热带集合群落中蛙类分类和功能β多样性对环境和空间预测因子的响应存在差异。
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9
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4
Proposing a resolution to debates on diversity partitioning.提出关于多样性分割辩论的决议。
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6
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