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一种用于使用化学计量学方法进行重现性分析的多变量数据的评分指标。

A scoring metric for multivariate data for reproducibility analysis using chemometric methods.

作者信息

Sheen David A, de Carvalho Rocha Werickson Fortunato, Lippa Katrice A, Bearden Daniel W

机构信息

Chemical Sciences Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA.

National Institute of Metrology, Quality and Technology -INMETRO, Division of Chemical Metrology, 25250-020 Duque de Caxias, RJ, Brazil.

出版信息

Chemometr Intell Lab Syst. 2017 Mar 15;162:10-20. doi: 10.1016/j.chemolab.2016.12.010. Epub 2016 Dec 23.

Abstract

Process quality control and reproducibility in emerging measurement fields such as metabolomics is normally assured by interlaboratory comparison testing. As a part of this testing process, spectral features from a spectroscopic method such as nuclear magnetic resonance (NMR) spectroscopy are attributed to particular analytes within a mixture, and it is the metabolite concentrations that are returned for comparison between laboratories. However, data quality may also be assessed directly by using binned spectral data before the time-consuming identification and quantification. Use of the binned spectra has some advantages, including preserving information about trace constituents and enabling identification of process difficulties. In this paper, we demonstrate the use of binned NMR spectra to conduct a detailed interlaboratory comparison and composition analysis. Spectra of synthetic and biologically-obtained metabolite mixtures, taken from a previous interlaboratory study, are compared with cluster analysis using a variety of distance and entropy metrics. The individual measurements are then evaluated based on where they fall within their clusters, and a laboratory-level scoring metric is developed, which provides an assessment of each laboratory's individual performance.

摘要

在代谢组学等新兴测量领域,过程质量控制和可重复性通常通过实验室间比对测试来确保。作为该测试过程的一部分,来自核磁共振(NMR)光谱等光谱方法的光谱特征被归因于混合物中的特定分析物,而返回用于实验室间比较的是代谢物浓度。然而,在进行耗时的鉴定和定量之前,也可以直接使用分箱光谱数据来评估数据质量。使用分箱光谱有一些优点,包括保留有关痕量成分的信息以及能够识别过程中的困难。在本文中,我们展示了使用分箱NMR光谱进行详细的实验室间比较和成分分析。取自先前实验室间研究的合成和生物获得的代谢物混合物的光谱,使用各种距离和熵度量通过聚类分析进行比较。然后根据各个测量值在其聚类中的位置进行评估,并开发了一个实验室级评分度量,用于评估每个实验室的个体性能。

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