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通过 MAS 频率高于 100 kHz 的 NMR 光谱学拓展对完全质子化蛋白质组装体的结构分析领域。

Expanding the horizons for structural analysis of fully protonated protein assemblies by NMR spectroscopy at MAS frequencies above 100 kHz.

机构信息

Bruker Biospin Corporation, 15 Fortune Drive, Billerica, MA, United States.

Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, United States; Pittsburgh Center for HIV Protein Interactions, University of Pittsburgh School of Medicine, Pittsburgh, PA, United States.

出版信息

Solid State Nucl Magn Reson. 2017 Oct;87:117-125. doi: 10.1016/j.ssnmr.2017.07.001. Epub 2017 Jul 3.

Abstract

The recent breakthroughs in NMR probe technologies resulted in the development of MAS NMR probes with rotation frequencies exceeding 100 kHz. Herein, we explore dramatic increases in sensitivity and resolution observed at MAS frequencies of 110-111 kHz in a novel 0.7 mm HCND probe that enable structural analysis of fully protonated biological systems. Proton- detected 2D and 3D correlation spectroscopy under such conditions requires only 0.1-0.5 mg of sample and a fraction of time compared to conventional C-detected experiments. We discuss the performance of several proton- and heteronuclear- (C-,N-) based correlation experiments in terms of sensitivity and resolution, using a model microcrystalline fMLF tripeptide. We demonstrate the applications of ultrafast MAS to a large, fully protonated protein assembly of the 231-residue HIV-1 CA capsid protein. Resonance assignments of protons and heteronuclei, as well as H-N dipolar and H CSA tensors are readily obtained from the high sensitivity and resolution proton-detected 3D experiments. The approach demonstrated here is expected to enable the determination of atomic-resolution structures of large protein assemblies, inaccessible by current methodologies.

摘要

最近在 NMR 探头技术方面的突破导致了 MAS NMR 探头的发展,其旋转频率超过 100 kHz。在此,我们探索了在新型 0.7mm HCND 探头中观察到的 MAS 频率为 110-111 kHz 时灵敏度和分辨率的显著提高,这使得完全质子化生物系统的结构分析成为可能。在这种条件下,质子检测的 2D 和 3D 相关光谱仅需要 0.1-0.5mg 的样品和与传统 C 检测实验相比的一小部分时间。我们使用模型微结晶 fMLF 三肽讨论了几种基于质子和异核(C、N)的相关实验在灵敏度和分辨率方面的性能,使用模型微结晶 fMLF 三肽。我们展示了超快 MAS 在 231 个残基 HIV-1 CA 衣壳蛋白的大型全质子化蛋白质组装体中的应用。质子和异核(C、N)的共振分配,以及 H-N 偶极子和 H CSA 张量很容易从高灵敏度和分辨率的质子检测 3D 实验中获得。这里展示的方法有望能够确定当前方法无法获得的大型蛋白质组装体的原子分辨率结构。

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