Suppr超能文献

空肠弯曲菌的必需基因组。

Essential genome of Campylobacter jejuni.

作者信息

Mandal Rabindra K, Jiang Tieshan, Kwon Young Min

机构信息

Department of Poultry Science, University of Arkansas, Fayetteville, AR, 72701, USA.

Present Address: Department of Microbiology and Immunology, Clinical Translational Research Building, University of Louisville, Louisville, KY, 40202, USA.

出版信息

BMC Genomics. 2017 Aug 14;18(1):616. doi: 10.1186/s12864-017-4032-8.

Abstract

BACKGROUND

Campylobacter species are a leading cause of bacterial foodborne illness worldwide. Despite the global efforts to curb them, Campylobacter infections have increased continuously in both developed and developing countries. The development of effective strategies to control the infection by this pathogen is warranted. The essential genes of bacteria are the most prominent targets for this purpose. In this study, we used transposon sequencing (Tn-seq) of a genome-saturating library of Tn5 insertion mutants to define the essential genome of C. jejuni at a high resolution.

RESULT

We constructed a Tn5 mutant library of unprecedented complexity in C. jejuni NCTC 11168 with 95,929 unique insertions throughout the genome and used the genomic DNA of the library for the reconstruction of Tn5 libraries in the same (C. jejuni NCTC 11168) and different strain background (C. jejuni 81-176) through natural transformation. We identified 166 essential protein-coding genes and 20 essential transfer RNAs (tRNA) in C. jejuni NCTC 11168 which were intolerant to Tn5 insertions during in vitro growth. The reconstructed C. jejuni 81-176 library had 384 protein coding genes with no Tn5 insertions. Essential genes in both strain backgrounds were highly enriched in the cluster of orthologous group (COG) categories of 'Translation, ribosomal structure and biogenesis (J)', 'Energy production and conversion (C)', and 'Coenzyme transport and metabolism (H)'.

CONCLUSION

Comparative analysis among this and previous studies identified 50 core essential genes of C. jejuni, which can be further investigated for the development of novel strategies to control the spread of this notorious foodborne bacterial pathogen.

摘要

背景

弯曲杆菌属是全球细菌性食源性疾病的主要病因。尽管全球都在努力控制它们,但弯曲杆菌感染在发达国家和发展中国家都持续增加。因此有必要制定有效的策略来控制这种病原体的感染。细菌的必需基因是实现这一目标的最主要靶点。在本研究中,我们使用Tn5插入突变体的基因组饱和文库进行转座子测序(Tn-seq),以高分辨率定义空肠弯曲菌的必需基因组。

结果

我们在空肠弯曲菌NCTC 11168中构建了一个前所未有的复杂Tn5突变体文库,全基因组有95,929个独特插入位点,并通过自然转化使用该文库的基因组DNA在相同菌株背景(空肠弯曲菌NCTC 11168)和不同菌株背景(空肠弯曲菌81-176)中重建Tn5文库。我们在空肠弯曲菌NCTC 11168中鉴定出166个必需蛋白质编码基因和20个必需转移RNA(tRNA),它们在体外生长过程中对Tn5插入不耐受。重建的空肠弯曲菌81-176文库有384个无Tn5插入的蛋白质编码基因。两种菌株背景中的必需基因在直系同源簇(COG)分类的“翻译、核糖体结构和生物合成(J)”、“能量产生和转换(C)”以及“辅酶运输和代谢(H)”中高度富集。

结论

本研究与之前研究的比较分析确定了空肠弯曲菌的50个核心必需基因,可对其进行进一步研究,以开发控制这种臭名昭著的食源细菌性病原体传播的新策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e54/5557513/5d1af91745e6/12864_2017_4032_Fig1_HTML.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验