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新种斯韦齐芽孢杆菌和海恩斯芽孢杆菌,从沙漠土壤中分离得到。

Bacillus swezeyi sp. nov. and Bacillus haynesii sp. nov., isolated from desert soil.

作者信息

Dunlap Christopher A, Schisler David A, Perry Elizabeth B, Connor Nora, Cohan Frederick M, Rooney Alejandro P

机构信息

United States Department of Agriculture, Crop Bioprotection Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, Peoria, IL, USA.

Department of Biology, Wesleyan University, Middletown, CT, USA.

出版信息

Int J Syst Evol Microbiol. 2017 Aug;67(8):2720-2725. doi: 10.1099/ijsem.0.002007. Epub 2017 Aug 15.

Abstract

Two isolates of Gram-reaction-positive, facultatively anaerobic, motile, rod-shaped, endospore-forming bacteria were identified during a survey of the diversity of strains belonging to the genus Bacillus deposited in the Agriculture Research Service Culture Collection. These strains were originally isolated from soil in Evolution Canyon III (Israel) in a survey of ecological diversification. Phylogenetic analysis of the 16S rRNA gene of strains NRRL B-41294T and NRRL B-41327T determined they were closely related to members of the Bacillus licheniformis clade. The genome of each strain was sequenced, and further analysis indicated that the strains represented unique species based on in silico DNA-DNA hybridization analyses. A phylogenomic analysis revealed that NRRL B-41294T and NRRL B-41327T were closely related to the group that includes B. licheniformis. In phenotypic characterization, both NRRL B-41294T and NRRL B-41327T were found to grow at temperatures of between 15 and 60 °C and tolerated up to 12 % NaCl (w/v). The predominant cellular fatty acids were anteiso-C15 : 0 and iso-C15 : 0, and peptidoglycan from cell walls contained meso-diaminopimelic acid. The DNA G+C content was 45.7 and 44.3 mol% for NRRL B-41327T and NRRL B-41294T, respectively. Furthermore, each strain had a unique carbon utilization pattern that distinguished it from its nearest phylogenetic neighbours. Based upon the consensus of phylogenetic and phenotypic analyses, we conclude that these strains represent two novel species within the genus Bacillus, for which the name Bacillus swezeyi sp. nov. is proposed, with type strain NRRL B-41294T (=CCUG 70177T), and the name Bacillus haynesii sp. nov. is proposed, with type strain NRRL B-41327T (=CCUG 70178T).

摘要

在对保藏于农业研究局菌种保藏中心的芽孢杆菌属菌株多样性进行调查期间,鉴定出两株革兰氏反应阳性、兼性厌氧、具运动性、杆状、产芽孢的细菌。这些菌株最初是在对进化峡谷III(以色列)土壤进行生态多样性调查时分离得到的。对菌株NRRL B - 41294T和NRRL B - 41327T的16S rRNA基因进行系统发育分析,确定它们与地衣芽孢杆菌分支的成员密切相关。对每个菌株的基因组进行了测序,进一步分析表明,基于计算机模拟DNA - DNA杂交分析,这些菌株代表了独特的物种。系统基因组分析表明,NRRL B - 41294T和NRRL B - 41327T与包括地衣芽孢杆菌在内的类群密切相关。在表型特征方面,发现NRRL B - 41294T和NRRL B - 41327T都能在15至60°C的温度下生长,并且耐受高达12%(w/v)的NaCl。主要的细胞脂肪酸为anteiso - C15:0和iso - C15:0,细胞壁的肽聚糖含有内消旋二氨基庚二酸。NRRL B - 41327T和NRRL B - 41294T的DNA G + C含量分别为45.7和44.3 mol%。此外,每个菌株都有独特的碳利用模式,使其与其最近的系统发育邻居区分开来。基于系统发育和表型分析的共识,我们得出结论,这些菌株代表芽孢杆菌属内的两个新物种,提议将其命名为斯韦齐芽孢杆菌(Bacillus swezeyi sp. nov.),模式菌株为NRRL B - 41294T(=CCUG 70177T),并提议将另一个命名为海恩斯芽孢杆菌(Bacillus haynesii sp. nov.),模式菌株为NRRL B - 41327T(=CCUG 70178T)。

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