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节肢动物的基因组大小;系统发育、栖息地和生活史在昆虫和甲壳类动物中的不同作用。

Genome size in arthropods; different roles of phylogeny, habitat and life history in insects and crustaceans.

作者信息

Alfsnes Kristian, Leinaas Hans Petter, Hessen Dag Olav

机构信息

Department of Biosciences University of Oslo Oslo Norway.

Department of Molecular Biology Norwegian Institute of Public Health Oslo Norway.

出版信息

Ecol Evol. 2017 Jun 22;7(15):5939-5947. doi: 10.1002/ece3.3163. eCollection 2017 Aug.

Abstract

Despite the major role of genome size for physiology, ecology, and evolution, there is still mixed evidence with regard to proximate and ultimate drivers. The main causes of large genome size are proliferation of noncoding elements and/or duplication events. The relative role and interplay between these proximate causes and the evolutionary patterns shaped by phylogeny, life history traits or environment are largely unknown for the arthropods. Genome size shows a tremendous variability in this group, and it has a major impact on a range of fitness-related parameters such as growth, metabolism, life history traits, and for many species also body size. In this study, we compared genome size in two major arthropod groups, insects and crustaceans, and related this to phylogenetic patterns and parameters affecting ambient temperature (latitude, depth, or altitude), insect developmental mode, as well as crustacean body size and habitat, for species where data were available. For the insects, the genome size is clearly phylogeny-dependent, reflecting primarily their life history and mode of development, while for crustaceans there was a weaker association between genome size and phylogeny, suggesting life cycle strategies and habitat as more important determinants. Maximum observed latitude and depth, and their combined effect, showed positive, and possibly phylogenetic independent, correlations with genome size for crustaceans. This study illustrate the striking difference in genome sizes both between and within these two major groups of arthropods, and that while living in the cold with low developmental rates may promote large genomes in marine crustaceans, there is a multitude of proximate and ultimate drivers of genome size.

摘要

尽管基因组大小在生理学、生态学和进化中起着重要作用,但关于其直接和最终驱动因素的证据仍然参差不齐。基因组庞大的主要原因是非编码元件的增殖和/或复制事件。在节肢动物中,这些直接原因与由系统发育、生活史特征或环境所塑造的进化模式之间的相对作用和相互作用在很大程度上尚不清楚。在这一类群中,基因组大小表现出极大的变异性,并且对一系列与适应性相关的参数有着重大影响,如生长、代谢、生活史特征,而且对许多物种来说还包括体型。在本研究中,我们比较了昆虫和甲壳类这两个主要节肢动物类群的基因组大小,并将其与系统发育模式以及影响环境温度(纬度、深度或海拔)、昆虫发育模式、甲壳类体型和栖息地的参数相关联,这些数据适用于相关物种。对于昆虫来说,基因组大小明显依赖于系统发育,主要反映了它们的生活史和发育模式,而对于甲壳类动物,基因组大小与系统发育之间的关联较弱,这表明生命周期策略和栖息地是更重要的决定因素。观察到的最大纬度和深度及其综合效应,与甲壳类动物的基因组大小呈正相关,并且可能是系统发育独立的。这项研究表明,这两个主要节肢动物类群之间以及类群内部的基因组大小存在显著差异,而且虽然生活在低温且发育速度较慢的环境中可能会促使海洋甲壳类动物拥有庞大的基因组,但基因组大小存在众多直接和最终驱动因素。

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