Farhadi Ahmad, Jeffs Andrew G, Farahmand Hamid, Rejiniemon Thankappan Sarasam, Smith Greg, Lavery Shane D
School of Biological Sciences, University of Auckland, Auckland, New Zealand.
Department of Natural Resources and Environment, School of Agriculture, Shiraz University, Shiraz, Iran.
BMC Evol Biol. 2017 Aug 18;17(1):195. doi: 10.1186/s12862-017-1050-8.
There is increasing recognition of the concordance between marine biogeographic and phylogeographic boundaries. However, it is still unclear how population-level divergence translates into species-level divergence, and what are the principal factors that first initiate that divergence, and then maintain reproductive isolation. This study examines the likely forces driving population and lineage divergences in the broadly-distributed Indo-Pacific spiny lobster Panulirus homarus, which has peripheral divergent lineages in the west and east. The study focuses particularly on the West Indian Ocean, which is emerging as a region of unexpected diversity. Mitochondrial control region (mtCR) and COI sequences as well as genotypes of 9 microsatellite loci were examined in 410 individuals from 17 locations grouped into 7 regions from South Africa in the west, and eastward across to Taiwan and the Marquesas Islands. Phylogenetic and population-level analyses were used to test the significance and timing of divergences and describe the genetic relationships among populations.
Analyses of the mtCR revealed high levels of divergence among the seven regions (Ф = 0.594, P < 0.001). Microsatellite analyses also revealed significant divergence among regions, but at a much lower level (F = 0.066, P < 0.001). The results reveal different patterns of mtCR v. nDNA divergence between the two distinct peripheral lineages: a subspecies in South Africa and Madagascar, and a phylogeographically diverged population in the Marquesas. The results also expose a number of other more fine-scale population divergences, particularly in the Indian Ocean.
The divergence of peripheral lineages in the west and east of the species' range appear to have been initiated and maintained by very different processes. The pattern of mitochondrial and nuclear divergence of the western lineage, implicates processes of parapatric isolation, secondary contact and introgression, and suggests possible maintenance through adaptation and behavioural reproductive isolation. In contrast, the eastern lineage appears to have diverged through a rare colonisation event, maintained through long-term isolation, and matches expectations of the core-periphery hypothesis. The process of active peripheral speciation may be a common force in the Indo-Pacific that helps drive some of the regions' recognized biogeographic boundaries.
海洋生物地理边界与系统发育地理边界之间的一致性越来越受到认可。然而,目前仍不清楚种群水平的分化如何转化为物种水平的分化,以及最初引发这种分化并维持生殖隔离的主要因素是什么。本研究调查了广泛分布的印度-太平洋多刺龙虾(Panulirus homarus)种群和谱系分化可能的驱动因素,该龙虾在西部和东部有外围分化谱系。该研究特别关注西印度洋,这一地区正呈现出意想不到的多样性。对来自17个地点的410个个体的线粒体控制区(mtCR)和COI序列以及9个微卫星位点的基因型进行了检测,这些地点分为7个区域,从西部的南非开始,向东延伸至台湾和马克萨斯群岛。利用系统发育和种群水平分析来检验分化的显著性和时间,并描述种群之间的遗传关系。
对mtCR的分析显示,七个区域之间存在高度分化(Ф = 0.594,P < 0.001)。微卫星分析也显示区域间存在显著分化,但程度要低得多(F = 0.066,P < 0.001)。结果揭示了两个不同外围谱系之间mtCR与核DNA(nDNA)分化的不同模式:南非和马达加斯加的一个亚种,以及马克萨斯群岛一个系统发育分化的种群。结果还揭示了一些其他更精细尺度的种群分化,特别是在印度洋。
该物种分布范围西部和东部的外围谱系分化似乎是由非常不同的过程引发和维持的。西部谱系的线粒体和核分化模式涉及到邻域隔离、二次接触和基因渗入过程,并表明可能通过适应和行为生殖隔离来维持。相比之下,东部谱系似乎是通过一次罕见的殖民事件而分化,通过长期隔离得以维持,符合核心-外围假说的预期。活跃的外围物种形成过程可能是印度-太平洋地区一种常见的力量,有助于推动该地区一些公认的生物地理边界的形成。