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用于植物改良的代谢组学:现状与展望

Metabolomics for Plant Improvement: Status and Prospects.

作者信息

Kumar Rakesh, Bohra Abhishek, Pandey Arun K, Pandey Manish K, Kumar Anirudh

机构信息

Department of Plant Sciences, University of Hyderabad (UoH)Hyderabad, India.

International Crops Research Institute for the Semi-Arid Tropics (ICRISAT)Hyderabad, India.

出版信息

Front Plant Sci. 2017 Aug 7;8:1302. doi: 10.3389/fpls.2017.01302. eCollection 2017.

Abstract

Post-genomics era has witnessed the development of cutting-edge technologies that have offered cost-efficient and high-throughput ways for molecular characterization of the function of a cell or organism. Large-scale metabolite profiling assays have allowed researchers to access the global data sets of metabolites and the corresponding metabolic pathways in an unprecedented way. Recent efforts in metabolomics have been directed to improve the quality along with a major focus on yield related traits. Importantly, an integration of metabolomics with other approaches such as quantitative genetics, transcriptomics and genetic modification has established its immense relevance to plant improvement. An effective combination of these modern approaches guides researchers to pinpoint the functional gene(s) and the characterization of massive metabolites, in order to prioritize the candidate genes for downstream analyses and ultimately, offering trait specific markers to improve commercially important traits. This in turn will improve the ability of a plant breeder by allowing him to make more informed decisions. Given this, the present review captures the significant leads gained in the past decade in the field of plant metabolomics accompanied by a brief discussion on the current contribution and the future scope of metabolomics to accelerate plant improvement.

摘要

后基因组时代见证了前沿技术的发展,这些技术为细胞或生物体功能的分子表征提供了经济高效且高通量的方法。大规模代谢物谱分析方法使研究人员以前所未有的方式获取代谢物的全局数据集以及相应的代谢途径。代谢组学领域最近的努力旨在提高质量,并主要关注产量相关性状。重要的是,代谢组学与其他方法(如数量遗传学、转录组学和基因修饰)的整合已证明其与植物改良具有极大的相关性。这些现代方法的有效结合引导研究人员确定功能基因并表征大量代谢物,以便为下游分析确定候选基因的优先级,并最终提供性状特异性标记以改善商业上重要的性状。这反过来又将提高植物育种者做出更明智决策的能力。鉴于此,本综述总结了过去十年植物代谢组学领域取得的重大进展,并简要讨论了代谢组学对加速植物改良的当前贡献和未来前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/526f/5545584/154e6ed2c232/fpls-08-01302-g001.jpg

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