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地衣栖寒球藻属,新属,新种,一种来自地衣主导的苔原土壤的等球藻科耐冷代表物种。

Tundrisphaera lichenicola gen. nov., sp. nov., a psychrotolerant representative of the family Isosphaeraceae from lichen-dominated tundra soils.

作者信息

Kulichevskaya Irina S, Ivanova Anastasia A, Detkova Ekaterina N, Rijpstra W Irene C, Sinninghe Damsté Jaap S, Dedysh Svetlana N

机构信息

Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow 119071, Russia.

Department of Marine Microbiology and Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University, PO Box 59, 1790 AB Den Burg, The Netherlands.

出版信息

Int J Syst Evol Microbiol. 2017 Sep;67(9):3583-3589. doi: 10.1099/ijsem.0.002172. Epub 2017 Aug 22.

Abstract

Two strains of aerobic, budding, pink-pigmented bacteria, P12T and P515, were isolated from a lichen-dominated peatland and a forested tundra soil of north-western Siberia, respectively. Cells of these isolates were represented by non-motile spheres that occurred singly or were arranged in short chains and aggregates. While growing on solid media, cells of strains P12T and P515 attached to the surface by means of holdfast-like appendages. These isolates were mildly acidophilic (optimum growth at pH 5.5-6.0), psychrotolerant bacteria, which displayed tolerance of low temperatures (4-15 °C), grew optimally at 15-22 °C and did not grow at temperatures above 28 °C. The preferred growth substrates were sugars and some heteropolysaccharides. The major fatty acids were C18 : 1ω9c, C16 : 0 and C14 : 0. Trimethylornithine lipid was the major polar lipid. The only quinone was MK-6, and the G+C content of the DNA was 61.2-62.2 mol%. Strains P12T and P515 possessed identical 16S rRNA gene sequences, which affiliated them with the family Isosphaeraceae, order Planctomycetales, and these displayed the highest similarity (93-94 %) to 16S rRNA gene sequences from members of the genus Singulisphaera. However, the signature fatty acid of species of the genus Singulisphaera, i.e. C18 : 2ω6c,12c, was absent in cells of strains P12T and P515. They also differed from members of the genus Singulisphaera by substrate utilization pattern and a number of physiological characteristics. Based on these data, the novel isolates should be considered as representing a novel genus and species of planctomycetes, for which the name Tundrisphaera lichenicola gen. nov., sp. nov, is proposed. The type strain is P12T (=LMG 29571T=VKM B-3044T).

摘要

分别从西伯利亚西北部以地衣为主的泥炭地和森林苔原土壤中分离出两株需氧、出芽、产粉色色素的细菌,P12T和P515。这些分离株的细胞呈无运动性的球形,单个存在或排列成短链及聚集体。在固体培养基上生长时,P12T和P515菌株的细胞通过类似固着器的附属物附着于表面。这些分离株为微嗜酸菌(最适生长pH为5.5 - 6.0),耐冷细菌,能耐受低温(4 - 15 °C),在15 - 22 °C生长最佳,在28 °C以上温度不生长。首选的生长底物是糖类和一些杂多糖。主要脂肪酸为C18 : 1ω9c、C16 : 0和C14 : 0。三甲胺鸟氨酸脂是主要的极性脂。唯一的醌为MK - 6,DNA的G + C含量为61.2 - 62.2 mol%。P12T和P515菌株具有相同的16S rRNA基因序列,这使其隶属于浮霉菌目等球藻科,并且与单球藻属成员的16S rRNA基因序列显示出最高的相似性(93 - 94 %)。然而,P12T和P515菌株的细胞中不存在单球藻属物种的标志性脂肪酸,即C18 : 2ω6c,12c。它们在底物利用模式和一些生理特征方面也与单球藻属成员不同。基于这些数据,这些新分离株应被视为代表了浮霉菌的一个新属和新物种,为此提出了地衣冻土球藻属(Tundrisphaera lichenicola),新属,新种。模式菌株为P12T(=LMG 29571T=VKM B - 3044T)。

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