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红马比基菌属,新属,新种,一种从海洋沉积物中分离出的细菌,以及在α-变形菌纲中提出新科——马比基菌科。

Mabikibacter ruber gen. nov., sp. nov., a bacterium isolated from marine sediment, and proposal of Mabikibacteraceae fam. nov. in the class Alphaproteobacteria.

作者信息

Choi Grace, Gao Ming, Lee Dae-Sung, Choi Hyukjae

机构信息

Department of Applied Research, Marine Biotechnology Research Division, 75, Jangsan-ro 101beon-gil, Janghang-eup, Seocheon-gun, Chungcheongnam-do, 33662, Republic of Korea.

College of Pharmacy, Yeungnam University, 280 daehak-ro, Gyeongsan-si, Gyeongsangbuk-do 38541, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2017 Sep;67(9):3375-3380. doi: 10.1099/ijsem.0.002121. Epub 2017 Aug 25.

Abstract

Bacterial strain YP382-1-AT was isolated from marine sediment at Gimnyeong Beach, Jeju Island, Republic of Korea. This strain was found to be aerobic and Gram-stain-negative, with red to purple pigmentation. Cells of strain YP382-1-AT were motile, had a single polar flagellum and were short rod-shaped. The predominant quinone in strain YP382-1-AT was Q-10. The major fatty acid was C18 : 1ω7c and the DNA G+C content was 60.3 mol%. Phylogenetic analysis based on comparisons of 16S rRNA gene sequences showed that strain YP382-1-AT belonged to the order Rhizobiales in the class Alphaproteobacteria. This strain exhibited very low 16S rRNA gene sequence similarity (no higher than 94.5 %) to the type strains of recognized bacterial species of the order Rhizobiales. Strain YP382-1-AT appeared as a distinct branch within Rhizobiales in the phylogenetic tree generated. On the basis of the data presented, strain YP382-1-AT is considered to represent a novel species of a new genus, classified within a new family. The name Mabikibacter ruber gen. nov., sp. nov., of the new family Mabikibacteraceae fam. nov. is proposed. The type strain of Mabikibacter ruber is YP382-1-AT (=JCM 31727T=KCCM 90265T).

摘要

细菌菌株YP382 - 1 - AT是从韩国济州岛金宁海滩的海洋沉积物中分离出来的。该菌株为需氧型,革兰氏染色阴性,具有红至紫色色素沉着。菌株YP382 - 1 - AT的细胞具有运动性,有一根单极鞭毛,呈短杆状。菌株YP382 - 1 - AT中的主要醌为Q - 10。主要脂肪酸为C18 : 1ω7c,DNA的G + C含量为60.3摩尔%。基于16S rRNA基因序列比较的系统发育分析表明,菌株YP382 - 1 - AT属于α-变形菌纲中的根瘤菌目。该菌株与根瘤菌目中已确认细菌物种的模式菌株表现出非常低的16S rRNA基因序列相似性(不高于94.5 %)。在生成的系统发育树中,菌株YP382 - 1 - AT在根瘤菌目中呈现为一个独特的分支。根据所提供的数据,菌株YP382 - 1 - AT被认为代表了一个新属的新物种,归类于一个新科。提出了新科马比基杆菌科(Mabikibacteraceae fam. nov.)的新属名马比基杆菌属(Mabikibacter gen. nov.)和新种名红马比基杆菌(Mabikibacter ruber sp. nov.)。红马比基杆菌的模式菌株为YP382 - 1 - AT(=JCM 31727T=KCCM 90265T)。

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