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海洋中生根瘤菌新种,从深层海水中分离得到。

Mesorhizobium oceanicum sp. nov., isolated from deep seawater.

作者信息

Fu Ge-Yi, Yu Xiao-Yun, Zhang Chong-Ya, Zhao Zhe, Wu Dildar, Su Yue, Wang Rui-Jun, Han Shuai-Bo, Wu Min, Sun Cong

机构信息

Ocean College, Zhejiang University, Zhoushan 316021, PR China.

College of Life Sciences, Zhejiang University, Hangzhou 310058, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Aug;67(8):2739-2745. doi: 10.1099/ijsem.0.002009.

Abstract

A novel Gram-staining-negative, oval-shaped (0.4-0.6×0.8-1.0 µm), non-motile strain without flagella, designated B7T, was isolated from deep seawater in the South China Sea. Strain B7T was able to grow at 25-40 °C (optimum 35 °C), at pH 5.5-9.0 (optimum pH 7.0) and with 0-8 % (w/v) NaCl (optimum 3 %). Chemotaxonomic analysis showed that the predominant isoprenoid quinone was Q-10 and the dominant fatty acids were C19 : 0 cyclo 8c and summed feature 8 (C18 : 1ω7c/C18 : 1ω6c). The polar lipids of strain B7T were diphosphatidyglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, one unknown aminophospholipid, one unknown glycolipid and three unknown lipids. The DNA G+C content of the genomic DNA was 65.1 mol%. Phylogenetic analysis of 16S rRNA gene sequences showed that strain B7T belongs to the genus Mesorhizobium with similarities ranging from 96.2 to 97.5 %. Phylogenetic analyses of housekeeping genes recA, atpD and glnII indicated that strain B7T represented a distinct evolutionary lineage with the genus Mesorhizobium. OrthoANI values between strain B7T and related strains of the genus Mesorhizobium (<80 %) were lower than the threshold value of 95 % ANI relatedness for species demarcation. Therefore, strain B7T is concluded to represent a novel species of the genus Mesorhizobium, for which the name Mesorhizobium oceanicumsp. nov. is proposed. The type strain is B7T (=KCTC 42783T=MCCC 1K02305T).

摘要

从中国南海深层海水中分离出一株新型革兰氏染色阴性、椭圆形(0.4 - 0.6×0.8 - 1.0 µm)、无鞭毛的不运动菌株,命名为B7T。菌株B7T能够在25 - 40°C(最适温度35°C)、pH 5.5 - 9.0(最适pH 7.0)以及0 - 8%(w/v)NaCl(最适3%)的条件下生长。化学分类分析表明,主要的类异戊二烯醌为Q - 10,主要脂肪酸为C19 : 0环8c和总和特征8(C18 : 1ω7c/C18 : 1ω6c)。菌株B7T的极性脂质为双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱、一种未知氨基磷脂、一种未知糖脂和三种未知脂质。基因组DNA的G + C含量为65.1 mol%。16S rRNA基因序列的系统发育分析表明,菌株B7T属于中生根瘤菌属,相似度在96.2%至97.5%之间。看家基因recA、atpD和glnII的系统发育分析表明,菌株B7T代表了中生根瘤菌属中一个独特的进化谱系。菌株B7T与中生根瘤菌属相关菌株之间的OrthoANI值(<80%)低于物种划分的95% ANI相关性阈值。因此,得出结论菌株B7T代表中生根瘤菌属的一个新物种,为此提出新名称海洋中生根瘤菌(Mesorhizobium oceanicumsp. nov.)。模式菌株为B7T(=KCTC 42783T = MCCC 1K02305T)。

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