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基于 ITS2 rDNA 的按蚊黑缘亚种成员的分子系统发育。

Molecular phylogeny of Anopheles hyrcanus group members based on ITS2 rDNA.

机构信息

National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention; WHO Collaborating Centre for Tropical Diseases; National Center for International Research on Tropical Diseases, Ministry of Science and Technology; Key Laboratory of Parasite and Vector Biology, Ministry of Health, Shanghai, 20025, People's Republic of China.

出版信息

Parasit Vectors. 2017 Sep 7;10(1):417. doi: 10.1186/s13071-017-2351-x.

Abstract

BACKGROUND

The Anopheles hyrcanus group includes 25 species, and is widely distributed in the Oriental and Palaearctic regions. Several species within this group are vectors of malaria, lymphatic filariasis and Japanese encephalitis. It is difficult or impossible to identify cryptic species based on their morphological characteristics, with some closely related species of the Hyrcanus Group have similar adult morphological characteristics. Thus, their molecular identification has been an important complementary method to traditional morphological taxonomy.

METHODS

We used 461 ribosomal DNA (rDNA) internal transcribed spacer 2 (ITS2) sequences relating to 19 species to reconstruct the molecular phylogeny of the Hyrcanus Group across its range. In addition, we compared the performance of rDNA ITS2 to that of mitochondrial DNA (mtDNA) cytochrome c oxidase subunit 1 gene (cox1) to assess the genetic divergence of Hyrcanus Group sibling species.

RESULTS

Based on Kimura's 2-parameter (K2P) distance model, the average conspecific ITS2 divergence was 0.003, whereas sequence divergence between species averaged 0.480. Average ITS2 sequence divergences were almost 160 times higher among the Hyrcanus Group members than within each species. Two sets of sibling species, An. lesteri Baisas & Hu, 1936 and An. paraliae Sandosham, 1959; and An. sinensis Wiedemann, 1828, An. belenrae Rueda, 2005, and An. kleini Rueda, 2005, were resolved by ITS2. Each of these species was represented as an independent lineage in the phylogenetic tree. Results suggest that An. pseudopictus Grassi, 1899 and An. hyrcanus (Pallas, 1771) are most likely a single species. We uncovered two new ITS2 lineages that require further study before resolving their true taxonomic status, and designed a diagnostic polymerase chain reaction (PCR) assay to distinguish five morphologically similar species.

CONCLUSIONS

Nuclear and mitochondrial genes generally provided consistent results for subgroup division. Compared to cox1, ITS2 is a more reliable tool for studying phylogenetic relationships among closely related mosquito taxa. Based on species-specific differences in ITS2 sequences, the multiplex PCR assay developed here can be used to improve the efficiency of vector identification. Thus, this research will promote the progress of malaria vector surveillance in both epidemic and non-epidemic areas of South and East Asia.

摘要

背景

按蚊黑足组包括 25 个种,广泛分布于东洋界和古北界。该组中的一些种是疟疾、丝虫病和乙型脑炎的媒介。根据形态特征很难或不可能识别隐种,因为黑足组的一些近缘种具有相似的成虫形态特征。因此,它们的分子鉴定已成为传统形态分类学的重要补充方法。

方法

我们使用了与 19 种相关的 461 条核糖体 DNA(rDNA)内部转录间隔区 2(ITS2)序列来重建该组在其分布范围内的分子系统发育。此外,我们比较了 rDNA ITS2 与线粒体 DNA(mtDNA)细胞色素 c 氧化酶亚基 1 基因(cox1)的性能,以评估黑足组近缘种的遗传分化。

结果

基于 Kimura 的 2-参数(K2P)距离模型,同种内 ITS2 的平均分歧度为 0.003,而种间序列分歧度平均为 0.480。黑足组成员之间的平均 ITS2 序列分歧度几乎是每个种内的 160 倍。按蚊 lesteri Baisas & Hu,1936 和 An. paraliae Sandosham,1959;以及中华按蚊 Wiedemann,1828、安蚊 belenrae Rueda,2005 和安蚊 kleini Rueda,2005 这两组近缘种通过 ITS2 得到了区分。这些种中的每一种都在系统发育树中作为一个独立的谱系出现。结果表明,按蚊 pseudopictus Grassi,1899 和按蚊 hyrcanus(Pallas,1771)可能是一个单一的种。我们发现了两个新的 ITS2 谱系,需要进一步研究才能确定它们的真实分类地位,并设计了一种诊断聚合酶链反应(PCR)检测方法来区分 5 种形态相似的种。

结论

核基因和线粒体基因通常为亚群划分提供一致的结果。与 cox1 相比,ITS2 是研究近缘蚊种系统发育关系的更可靠工具。基于 ITS2 序列的种间差异,这里开发的多重 PCR 检测可以提高媒介鉴定的效率。因此,这项研究将促进南亚和东亚疟疾媒介监测在流行区和非流行区的进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/30e2/5590201/c7a89158aecb/13071_2017_2351_Fig1_HTML.jpg

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