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可视化人细胞中 tRNA 依赖性错译。

Visualizing tRNA-dependent mistranslation in human cells.

机构信息

a Department of Biochemistry , The University of Western Ontario , London , ON , Canada.

b Department of Pathology , The University of Western Ontario , London , ON , Canada.

出版信息

RNA Biol. 2018;15(4-5):567-575. doi: 10.1080/15476286.2017.1379645. Epub 2017 Nov 9.

Abstract

High-fidelity translation and a strictly accurate proteome were originally assumed as essential to life and cellular viability. Yet recent studies in bacteria and eukaryotic model organisms suggest that proteome-wide mistranslation can provide selective advantages and is tolerated in the cell at higher levels than previously thought (one error in 6.9 × 10 in yeast) with a limited impact on phenotype. Previously, we selected a tRNA containing a single mutation that induces mistranslation with alanine at proline codons in yeast. Yeast tolerate the mistranslation by inducing a heat-shock response and through the action of the proteasome. Here we found a homologous human tRNA (G3:U70) mutant that is not aminoacylated with proline, but is an efficient alanine acceptor. In live human cells, we visualized mistranslation using a green fluorescent protein reporter that fluoresces in response to mistranslation at proline codons. In agreement with measurements in yeast, quantitation based on the GFP reporter suggested a mistranslation rate of up to 2-5% in HEK 293 cells. Our findings suggest a stress-dependent phenomenon where mistranslation levels increased during nutrient starvation. Human cells did not mount a detectable heat-shock response and tolerated this level of mistranslation without apparent impact on cell viability. Because humans encode ∼600 tRNA genes and the natural population has greater tRNA sequence diversity than previously appreciated, our data also demonstrate a cell-based screen with the potential to elucidate mutations in tRNAs that may contribute to or alleviate disease.

摘要

高保真翻译和严格准确的蛋白质组最初被认为是生命和细胞活力所必需的。然而,最近在细菌和真核模式生物中的研究表明,蛋白质组范围内的翻译错误可能提供选择优势,并且在细胞中容忍的水平高于以前的想象(在酵母中每 6.9×10 中有一个错误),对表型的影响有限。以前,我们选择了一种 tRNA,其中包含一个单一突变,该突变在酵母中诱导脯氨酸密码子的翻译错误,产生丙氨酸。酵母通过诱导热休克反应和通过蛋白酶体的作用来容忍这种翻译错误。在这里,我们发现了一种同源的人类 tRNA(G3:U70)突变体,它不能与脯氨酸酰化,但却是有效的丙氨酸接受体。在活的人类细胞中,我们使用绿色荧光蛋白报告基因来可视化翻译错误,该报告基因在脯氨酸密码子发生翻译错误时会发出荧光。与酵母中的测量结果一致,基于 GFP 报告基因的定量表明,HEK 293 细胞中的翻译错误率高达 2-5%。我们的研究结果表明,这是一种依赖于应激的现象,即在营养饥饿期间翻译错误水平增加。人类细胞没有检测到明显的热休克反应,并且在没有明显影响细胞活力的情况下容忍这种水平的翻译错误。由于人类编码约 600 个 tRNA 基因,并且自然种群的 tRNA 序列多样性比以前认识的要大,因此我们的数据还证明了一种基于细胞的筛选方法,该方法有可能阐明可能导致或缓解疾病的 tRNA 突变。

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