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解释微管能量平衡:偶极矩、电荷、范德华和溶剂化能的贡献。

Explaining the Microtubule Energy Balance: Contributions Due to Dipole Moments, Charges, van der Waals and Solvation Energy.

机构信息

Medicinal Chemistry Department, Heliopolis University, Cairo-Belbeis Desert Rd, El-Nahda, El-Salam, Cairo Governorate 11777, Egypt.

Department of Physics, University of Alberta, Edmonton, AB T6G 2E1, Canada.

出版信息

Int J Mol Sci. 2017 Sep 22;18(10):2042. doi: 10.3390/ijms18102042.

Abstract

Microtubules are the main components of mitotic spindles, and are the pillars of the cellular cytoskeleton. They perform most of their cellular functions by virtue of their unique dynamic instability processes which alternate between polymerization and depolymerization phases. This in turn is driven by a precise balance between attraction and repulsion forces between the constituents of microtubules (MTs)-tubulin dimers. Therefore, it is critically important to know what contributions result in a balance of the interaction energy among tubulin dimers that make up microtubules and what interactions may tip this balance toward or away from a stable polymerized state of tubulin. In this paper, we calculate the dipole-dipole interaction energy between tubulin dimers in a microtubule as part of the various contributions to the energy balance. We also compare the remaining contributions to the interaction energies between tubulin dimers and establish a balance between stabilizing and destabilizing components, including the van der Waals, electrostatic, and solvent-accessible surface area energies. The energy balance shows that the GTP-capped tip of the seam at the plus end of microtubules is stabilized only by - 9 kcal/mol, which can be completely reversed by the hydrolysis of a single GTP molecule, which releases + 14 kcal/mol and destabilizes the seam by an excess of + 5 kcal/mol. This triggers the breakdown of microtubules and initiates a disassembly phase which is aptly called a catastrophe.

摘要

微管是有丝分裂纺锤体的主要组成部分,也是细胞细胞骨架的支柱。它们通过其独特的动态不稳定性过程来执行大多数细胞功能,这些过程在聚合和去聚合相之间交替。这反过来又取决于微管(MT)-微管蛋白二聚体成分之间的吸引力和排斥力之间的精确平衡。因此,了解是什么贡献导致组成微管的微管蛋白二聚体之间的相互作用能达到平衡,以及什么相互作用可能使这种平衡倾向于或远离微管蛋白的稳定聚合状态是至关重要的。在本文中,我们计算了微管中微管蛋白二聚体之间的偶极-偶极相互作用能,作为能量平衡的各种贡献的一部分。我们还比较了微管蛋白二聚体之间的剩余相互作用能,并在稳定和不稳定成分之间建立了平衡,包括范德华力、静电力和溶剂可及表面积能。能量平衡表明,微管正极 seam 的 GTP 封端尖端仅通过-9 kcal/mol 稳定,这可以通过单个 GTP 分子的水解完全逆转,水解释放+14 kcal/mol,并通过多余的+5 kcal/mol 使 seam 不稳定。这引发了微管的解体,并引发了一个适当称为崩溃的组装阶段。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4da0/5666724/97dea1491245/ijms-18-02042-g001.jpg

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