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通过挖掘糙皮侧耳基因组发现新的脂肪酶。

New lipases by mining of Pleurotus ostreatus genome.

作者信息

Piscitelli Alessandra, Tarallo Vincenzo, Guarino Lucia, Sannia Giovanni, Birolo Leyla, Pezzella Cinzia

机构信息

Dipartimento di Scienze Chimiche, Università degli Studi di Napoli Federico II, Napoli, Italy.

出版信息

PLoS One. 2017 Sep 25;12(9):e0185377. doi: 10.1371/journal.pone.0185377. eCollection 2017.

DOI:10.1371/journal.pone.0185377
PMID:28945798
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5612753/
Abstract

The analysis of Pleurotus ostreatus genome reveals the presence of automatically annotated 53 lipase and 34 carboxylesterase putative coding-genes. Since no biochemical or physiological data are available so far, a functional approach was applied to identify lipases from P. ostreatus. In the tested growth conditions, four lipases were found expressed, with different patterns depending on the used C source. Two of the four identified proteins (PleoLip241 and PleoLip369), expressed in both analysed conditions, were chosen for further studies, such as an in silico analysis and their molecular characterization. To overcome limits linked to native production, a recombinant expression approach in the yeast Pichia pastoris was applied. Different expression levels were obtained: PleoLip241 reached a maximum activity of 4000 U/L, whereas PleoLip369 reached a maximum activity of 700 U/L. Despite their sequence similarity, these enzymes exhibited different substrate specificity and diverse stability at pH, temperature, and presence of metals, detergents and organic solvents. The obtained data allowed classifying PleoLip241 as belonging to the "true lipase" family. Indeed, by phylogenetic analysis the two proteins fall in different clusters. PleoLip241 was used to remove the hydrophobic layer from wool surface in order to improve its dyeability. The encouraging results obtained with lipase treated wool led to forecast PleoLip241 applicability in this field.

摘要

糙皮侧耳基因组分析显示,自动注释的脂肪酶和羧酸酯酶推定编码基因分别有53个和34个。由于目前尚无生化或生理数据,因此采用功能方法从糙皮侧耳中鉴定脂肪酶。在测试的生长条件下,发现有四种脂肪酶表达,其表达模式因所用碳源而异。在两种分析条件下均表达的四种已鉴定蛋白质中的两种(PleoLip241和PleoLip369)被选作进一步研究,如计算机分析及其分子表征。为克服与天然生产相关的限制,采用了在毕赤酵母中的重组表达方法。获得了不同的表达水平:PleoLip241的最大活性达到4000 U/L,而PleoLip369的最大活性达到700 U/L。尽管它们的序列相似,但这些酶在底物特异性以及在pH、温度、金属、洗涤剂和有机溶剂存在下的稳定性方面表现出差异。所得数据使PleoLip241被归类为属于“真正的脂肪酶”家族。实际上,通过系统发育分析,这两种蛋白质属于不同的簇。PleoLip241被用于去除羊毛表面的疏水层,以提高其染色性。用脂肪酶处理羊毛获得的令人鼓舞的结果预示了PleoLip241在该领域的适用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/5a7ef96ee83f/pone.0185377.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/59b3ed030dcc/pone.0185377.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/75caefac9dba/pone.0185377.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/e884c438c2ec/pone.0185377.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/fdd4648fce64/pone.0185377.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/5a7ef96ee83f/pone.0185377.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/59b3ed030dcc/pone.0185377.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/75caefac9dba/pone.0185377.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/e884c438c2ec/pone.0185377.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/fdd4648fce64/pone.0185377.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9c/5612753/5a7ef96ee83f/pone.0185377.g005.jpg

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