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CECT 7771 的糖酵解多功能性及其对寡糖和多糖的基因组反应。

The Glycolytic Versatility of CECT 7771 and Its Genome Response to Oligo and Polysaccharides.

机构信息

Microbial Ecology, Nutrition & Health Research Unit, Institute of Agrochemistry and Food Technology (Instituto de Agroquimica y Tecnologia de Alimentos-Consejo Superior de Investigaciones Científicas)Valencia, Spain.

出版信息

Front Cell Infect Microbiol. 2017 Aug 25;7:383. doi: 10.3389/fcimb.2017.00383. eCollection 2017.

Abstract

spp. are dominant components of the phylum Bacteroidetes in the gut microbiota and prosper in glycan enriched environments. However, knowledge of the machinery of specific species isolated from humans (like ) contributing to the utilization of dietary and endogenous sources of glycans and their byproducts is limited. We have used the cutting-edge nanopore-based technology to sequence the genome of CECT 7771, a human symbiont with a proven pre-clinical efficacy on metabolic and immune dysfunctions in obesity animal models. We have also used massive sequencing approaches to distinguish the genome expression patterns in response to carbon sources of different complexity during growth. At genome-wide level, our analyses globally demonstrate that strains exhibit an expanded glycolytic capability when compared with other species. Moreover, by studying the growth and whole-genome expression of CECT 7771 in response to different carbon sources, we detected a differential growth fitness and expression patterns across the genome depending on the carbon source of the culture media. The dietary fibers used exerted different effects on CECT 7771 activating different molecular pathways and, therefore, allowing the production of different metabolite types with potential impact on gut health. The genome and transcriptome analysis of CECT 7771, in response to different carbon sources, shows its high versatility to utilize both dietary and endogenous glycans along with the production of potentially beneficial end products for both the bacterium and the host, pointing to a mechanistic basis of a mutualistic relationship.

摘要

spp. 是肠道微生物群中拟杆菌门的主要组成部分,在富含聚糖的环境中繁殖。然而,对于从人类中分离出来的特定物种(如 )利用饮食和内源性糖及其副产物的机制的了解是有限的。我们使用了最先进的基于纳米孔的技术来测序 CECT 7771 的基因组,CECT 7771 是一种人类共生菌,在肥胖动物模型中具有代谢和免疫功能障碍的临床前疗效。我们还使用了大规模测序方法来区分在生长过程中对不同复杂程度的碳源的基因组表达模式。在全基因组水平上,我们的分析全球表明,与其他 物种相比, 菌株表现出扩展的糖酵解能力。此外,通过研究 CECT 7771 对不同碳源的生长和全基因组表达,我们检测到根据培养基的碳源,整个基因组的差异生长适应性和表达模式。所使用的膳食纤维对 CECT 7771 产生不同的影响,激活不同的分子途径,从而产生对肠道健康有潜在影响的不同代谢物类型。CECT 7771 对不同碳源的基因组和转录组分析表明,它具有高度的多功能性,可以利用饮食和内源性聚糖,并产生对细菌和宿主都有益的潜在产物,这为共生关系提供了一种机制基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc4c/5609589/02f971005e98/fcimb-07-00383-g0001.jpg

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