来自澳大利亚两名患脑膜炎儿童的柯萨奇病毒B5分离株的基因组序列
Genome Sequences of Coxsackievirus B5 Isolates from Two Children with Meningitis in Australia.
作者信息
Huang Bixing, Harrower Bruce, Burtonclay Peter, Constantino Tanya, Warrilow David
机构信息
Public Health Virology Laboratory, Queensland Health Forensic and Scientific Services, Coopers Plains, Queensland, Australia
Public Health Virology Laboratory, Queensland Health Forensic and Scientific Services, Coopers Plains, Queensland, Australia.
出版信息
Genome Announc. 2017 Oct 12;5(41):e01125-17. doi: 10.1128/genomeA.01125-17.
Abstract
Two coxsackievirus B5 (CVB5) strains were isolated from two children with aseptic meningitis in Australia. Their genomes were sequenced and found to be divergent from the previously reported CVB5 genome sequences, with both having 84% and 97% identities to the closest strains at the nucleotide and amino acid levels, respectively.
摘要
在澳大利亚，从两名患无菌性脑膜炎的儿童体内分离出两株柯萨奇病毒B5（CVB5）毒株。对它们的基因组进行了测序，发现与之前报道的CVB5基因组序列存在差异，在核苷酸和氨基酸水平上，它们与最相近毒株的同源性分别为84%和97%。
相似文献
1
Genome Sequences of Coxsackievirus B5 Isolates from Two Children with Meningitis in Australia.来自澳大利亚两名患脑膜炎儿童的柯萨奇病毒B5分离株的基因组序列
Genome Announc. 2017 Oct 12;5(41):e01125-17. doi: 10.1128/genomeA.01125-17.
2
[Genomic characteristics of coxsackievirus B5 A210/KM/09 strain isolated in Yunnan, China].[中国云南分离的柯萨奇病毒B5 A210/KM/09株的基因组特征]
Zhonghua Liu Xing Bing Xue Za Zhi. 2014 Mar;35(3):307-11.
3
Coxsackievirus B5 Aseptic Meningitis in Infants in Chiba Prefecture, Japan, in 2016.2016年日本千叶县婴儿感染柯萨奇病毒B5引发的无菌性脑膜炎
J Nippon Med Sch. 2018;85(3):187-190. doi: 10.1272/jnms.JNMS.2018_85-28.
4
An outbreak of aseptic meningitis caused by a distinct lineage of coxsackievirus B5 in China.中国由柯萨奇病毒 B5 独特谱系引起的无菌性脑膜炎爆发。
Int J Infect Dis. 2014 Jun;23:101-4. doi: 10.1016/j.ijid.2014.02.005. Epub 2014 Apr 16.
5
[Genome sequences of coxsackievirus B5 isolated from viral encephalitis patients in Henan province, 2011].[2011年从河南省病毒性脑炎患者中分离出的柯萨奇病毒B5的基因组序列]
Zhonghua Liu Xing Bing Xue Za Zhi. 2013 Dec;34(12):1213-5.
6
A coxsackievirus B5-associated aseptic meningitis outbreak in Shandong Province, China in 2009.2009 年中国山东省柯萨奇病毒 B5 相关无菌性脑膜炎爆发。
J Med Virol. 2013 Mar;85(3):483-9. doi: 10.1002/jmv.23478. Epub 2012 Dec 4.
7
Genetic diversity of the enteroviruses detected from cerebrospinal fluid (CSF) samples of patients with suspected aseptic meningitis in northern West Bank, Palestine in 2017.2017 年，在巴勒斯坦西岸北部，对疑似无菌性脑膜炎患者的脑脊液（CSF）样本中检测到的肠道病毒的遗传多样性。
PLoS One. 2018 Dec 10;13(12):e0202243. doi: 10.1371/journal.pone.0202243. eCollection 2018.
8
Recombination analysis of coxsackievirus B5 genogroup C.柯萨奇病毒B5 C基因型的重组分析
Arch Virol. 2018 Feb;163(2):539-544. doi: 10.1007/s00705-017-3608-6. Epub 2017 Nov 13.
9
[Complete genome sequence of Coxsackievirus B5 (CVB5/09) strain isolated in China and its phylogenetic analysis].[中国分离的柯萨奇病毒B5（CVB5/09）株全基因组序列及其系统发育分析]
Bing Du Xue Bao. 2010 Jul;26(4):283-9.
10
[Identification and phylogenic analysis of Coxsackie-virus B5 during an outbreak of aseptic meningitis in Shandong].[山东无菌性脑膜炎暴发期间柯萨奇B5病毒的鉴定及系统发育分析]
Zhonghua Liu Xing Bing Xue Za Zhi. 2010 Jan;31(1):64-8.
引用本文的文献
1
Expression Profiles of Differentially Expressed Circular RNAs and circRNA-miRNA-mRNA Regulatory Networks in SH-SY5Y Cells Infected with Coxsackievirus B5.柯萨奇病毒B5感染的SH-SY5Y细胞中差异表达环状RNA的表达谱及circRNA-miRNA-mRNA调控网络
Int J Genomics. 2022 Oct 10;2022:9298149. doi: 10.1155/2022/9298149. eCollection 2022.
2
Circular RNA circ_0076631 promotes coxsackievirus B3 infection through modulating viral translation by sponging miR-214-3p.环状RNA circ_0076631通过海绵化miR-214-3p调节病毒翻译来促进柯萨奇病毒B3感染。
Front Microbiol. 2022 Sep 6;13:975223. doi: 10.3389/fmicb.2022.975223. eCollection 2022.
3
Bioinformatics and Screening of a Circular RNA-microRNA-mRNA Regulatory Network Induced by Coxsackievirus Group B5 in Human Rhabdomyosarcoma Cells.生物信息学与柯萨奇病毒 B5 诱导的人横纹肌肉瘤细胞中环状 RNA-微小 RNA-信使 RNA 调控网络的筛选。
Int J Mol Sci. 2022 Apr 22;23(9):4628. doi: 10.3390/ijms23094628.
4
Novel Antiviral Activity of Ethyl 3-Hydroxyhexanoate Against Coxsackievirus B Infection.3-羟基己酸乙酯对柯萨奇病毒B感染的新型抗病毒活性
Front Microbiol. 2022 Apr 14;13:875485. doi: 10.3389/fmicb.2022.875485. eCollection 2022.
5
Novel NGS pipeline for virus discovery from a wide spectrum of hosts and sample types.用于从广泛宿主和样本类型中发现病毒的新型二代测序流程。
Virus Evol. 2020 Dec 2;6(2):veaa091. doi: 10.1093/ve/veaa091. eCollection 2020 Jul.
6
Genetic diversity of the enteroviruses detected from cerebrospinal fluid (CSF) samples of patients with suspected aseptic meningitis in northern West Bank, Palestine in 2017.2017 年，在巴勒斯坦西岸北部，对疑似无菌性脑膜炎患者的脑脊液（CSF）样本中检测到的肠道病毒的遗传多样性。
PLoS One. 2018 Dec 10;13(12):e0202243. doi: 10.1371/journal.pone.0202243. eCollection 2018.
本文引用的文献
1
Complete Coding Sequence of a Case of Chikungunya Virus Imported into Australia.输入澳大利亚的基孔肯雅病毒病例的完整编码序列
Genome Announc. 2017 May 11;5(19):e00310-17. doi: 10.1128/genomeA.00310-17.
2
Viral meningitis epidemics and a single, recent, recombinant and anthroponotic origin of swine vesicular disease virus.病毒性脑膜炎流行及猪水疱病病毒单一、近期、重组和人间起源。
Evol Med Public Health. 2015 Oct 27;2015(1):289-303. doi: 10.1093/emph/eov026.
3
Picornavirus and enterovirus diversity with associated human diseases.小核糖核酸病毒和肠道病毒的多样性及其相关人类疾病。
Infect Genet Evol. 2013 Mar;14:282-93. doi: 10.1016/j.meegid.2012.10.016. Epub 2012 Nov 29.
4
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic：一个集成和可扩展的桌面软件平台，用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
5
An automated genotyping tool for enteroviruses and noroviruses.一种用于肠病毒和诺如病毒的自动化基因分型工具。
J Clin Virol. 2011 Jun;51(2):121-5. doi: 10.1016/j.jcv.2011.03.006. Epub 2011 Apr 21.
6
Identification of 20 common human enterovirus serotypes by use of a reverse transcription-PCR-based reverse line blot hybridization assay.使用基于逆转录聚合酶链反应的反向线印迹杂交分析法鉴定20种常见人类肠道病毒血清型。
J Clin Microbiol. 2009 Sep;47(9):2737-43. doi: 10.1128/JCM.00823-09. Epub 2009 Jul 1.
7
Engineered BGMK cells for sensitive and rapid detection of enteroviruses.用于灵敏快速检测肠道病毒的工程化BGMK细胞。
J Clin Microbiol. 2002 Feb;40(2):366-71. doi: 10.1128/JCM.40.2.366-371.2002.
8
Complete nucleotide sequence of a coxsackie B5 virus and its relationship to swine vesicular disease virus.柯萨奇B5病毒的完整核苷酸序列及其与猪水疱病病毒的关系。
J Gen Virol. 1993 May;74 ( Pt 5):845-53. doi: 10.1099/0022-1317-74-5-845.
9
Complete nucleotide sequence of the genome of coxsackievirus B1.柯萨奇病毒B1基因组的完整核苷酸序列
Virology. 1987 Jan;156(1):64-73. doi: 10.1016/0042-6822(87)90436-3.
Zotero 插件