Dunn Nicholas, Priestley Victoria, Herraiz Alba, Arnold Richard, Savolainen Vincent
Department of Life Sciences Imperial College London Ascot UK.
Thomson Ecology Guildford UK.
Ecol Evol. 2017 Aug 24;7(19):7777-7785. doi: 10.1002/ece3.3316. eCollection 2017 Oct.
Although the presence/absence of aquatic invertebrates using environmental DNA (eDNA) has been established for several species, inferring population densities has remained problematic. The invasive American signal crayfish, (Dana), is the leading cause of decline in the UK's only native crayfish species, (Lereboullet). Methods to detect species at low abundances offer the opportunity for the early detection, and potential eradication, of before population densities reach threatening levels in areas occupied by . Using a factorial experimental design with aquaria, we investigated the impacts of biomass, sex ratio, and fighting behavior on the amount of eDNA released by , with the aim to infer density per aquarium depending on treatments. The amount of target eDNA in water samples from each aquarium was measured using the quantitative Polymerase Chain Reaction. We show that the presence of eggs significantly increases the concentration of crayfish eDNA per unit of mass, and that there is a significant relationship between eDNA concentration and biomass when females are egg-bearing. However, the relationship between crayfish biomass and eDNA concentration is lost in aquaria without ovigerous females. Female-specific tanks had significantly higher eDNA concentrations than male-specific tanks, and the prevention of fighting did not impact the amount of eDNA in the water. These results indicate that detection and estimate of crayfish abundance using eDNA may be more effective while females are ovigerous. This information should guide further research for an accurate estimation of crayfish biomass in the field depending on the season. Our results indicate that detection and quantification of egg-laying aquatic invertebrate species using eDNA could be most successful during periods when eggs are developing in the water. We recommend that practitioners consider the reproductive cycle of target species when attempting to study or detect aquatic species using eDNA in the field.
尽管利用环境DNA(eDNA)来确定水生无脊椎动物的存在与否已在多个物种中得到证实,但推断种群密度仍然存在问题。入侵性的美洲信号螯虾(Pacifastacus leniusculus (Dana))是导致英国唯一本土螯虾物种——白斑螯虾(Austropotamobius pallipes (Lereboullet))数量下降的主要原因。在种群密度达到威胁水平之前,低丰度物种的检测方法为早期发现并可能根除美洲信号螯虾提供了机会。我们采用水族箱的析因实验设计,研究了生物量、性别比例和争斗行为对美洲信号螯虾释放的eDNA量的影响,目的是根据处理方式推断每个水族箱中的密度。使用定量聚合酶链反应测量每个水族箱水样中目标eDNA的量。我们发现,卵的存在显著增加了单位质量螯虾eDNA的浓度,并且当雌性携带卵时,eDNA浓度与生物量之间存在显著关系。然而,在没有抱卵雌性的水族箱中,螯虾生物量与eDNA浓度之间的关系消失了。雌性专属水族箱中的eDNA浓度显著高于雄性专属水族箱,并且防止争斗对水中eDNA的量没有影响。这些结果表明,当雌性抱卵时,利用eDNA检测和估计螯虾丰度可能更有效。这些信息应指导进一步的研究,以便根据季节准确估计野外螯虾的生物量。我们的结果表明,在水中卵正在发育的时期,利用eDNA检测和量化产卵水生无脊椎动物物种可能最为成功。我们建议从业者在尝试在野外利用eDNA研究或检测水生物种时,考虑目标物种的繁殖周期。
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