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印度洋海洋球杆菌,新属,新种,一种从表层海水中分离出的红杆菌科成员。

Oceaniglobus indicus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from surface seawater.

作者信息

Li Jianyang, Huang Zhaobin, Lai Qiliang, Liu Xiupian, Wang Guangyi, Shao Zongze

机构信息

Key Laboratory of Marine Genetic Resources; Fujian Key Laboratory of Marine Genetic Resources; Fujian Collaborative Innovation Center of Marine Biological Resources; South China Sea Bio-Resource Exploitation and Utilization Collaborative Innovation Center, Third Institute of Oceanography, State Oceanic Administration (SOA), Xiamen 361005, PR China.

School of Environmental Science and Engineering, Tianjin University, Tianjin 300387, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Dec;67(12):4930-4935. doi: 10.1099/ijsem.0.002275. Epub 2017 Oct 18.

Abstract

A Gram-stain-negative, non-motile, aerobic and heterotrophic strain, designated 1-19b, was isolated from surface seawater in the Indian Ocean. The cells were ovoid or coccus (0.8-1.0 µm in diameter) with no flagellum. Activities of catalase and oxidase were positive. Growth was observed at salinity of 0.5-10 (%NaCl, w/v) with an optimum of 3-4, at pH 5-10 with an optimum of 7-8, and at 5-37 °C with an optimum of 28-35 °C. It accumulated poly-β-hydroxybutyrate granules inside the cell. Bacteriochlorophyll a was absent. The respiratory quinone was Q-10 and the dominant fatty acid was summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c). The major polar lipids comprised phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, an unidentified phospholipid and two unidentified polar lipids. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 1-19b belonged to the family Rhodobacteraceae and formed a distinct monophyletic clade with 'Oceaniovalibus guishaninsula' JLT2003 and Pontibaca methylaminivorans GRP21, exhibiting similarities of 94.7 and 92.2 %, respectively. The genomic DNA G+C content was 64.2 mol%. Based on the phenotypic, chemotaxonomic and genotypic data, strain 1-19b represents a novel species in a new genus of the family Rhodobacteraceae, for which the name Oceaniglobus indicus gen. nov., sp. nov. is proposed, with the type strain 1-19b (=MCCC 1A11863=KCTC 52709).

摘要

从印度洋表层海水中分离出一株革兰氏染色阴性、不运动、需氧且异养的菌株,命名为1-19b。细胞呈卵形或球菌状(直径0.8-1.0 µm),无鞭毛。过氧化氢酶和氧化酶活性呈阳性。在盐度为0.5-10(%NaCl,w/v)、最适盐度为3-4,pH为5-10、最适pH为7-8,以及温度为5-37 °C、最适温度为28-35 °C的条件下可观察到生长。它在细胞内积累聚-β-羟基丁酸酯颗粒。不存在细菌叶绿素a。呼吸醌为Q-10,主要脂肪酸为总和特征8(C18 : 1ω7c和/或C18 : 1ω6c)。主要极性脂类包括磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、二磷脂酰甘油、一种未鉴定的磷脂和两种未鉴定的极性脂类。基于16S rRNA基因序列的系统发育分析表明,菌株1-19b属于红杆菌科,与“桂山半岛海洋卵形菌”JLT2003和食甲基庞蒂杆菌GRP21形成一个独特的单系分支,相似性分别为94.7%和92.2%。基因组DNA G+C含量为64.2 mol%。基于表型、化学分类和基因型数据,菌株1-19b代表红杆菌科一个新属中的一个新物种,为此提出新属名Oceaniglobus,新种名Oceaniglobus indicus gen. nov., sp. nov.,模式菌株为1-19b(=MCCC 1A11863=KCTC 52709)。

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