• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于 Golden-Gate 的质粒组装模块化工具包简化了青枯菌物种复合体敲除菌株和多盒互补构建体的生成。

A modular toolbox for Golden-Gate-based plasmid assembly streamlines the generation of Ralstonia solanacearum species complex knockout strains and multi-cassette complementation constructs.

机构信息

Center for Plant Molecular Biology, Eberhard-Karls-University Tübingen, Tübingen 72076, Germany.

出版信息

Mol Plant Pathol. 2018 Jun;19(6):1511-1522. doi: 10.1111/mpp.12632. Epub 2018 Feb 1.

DOI:10.1111/mpp.12632
PMID:29077245
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6638168/
Abstract

Members of the Ralstonia solanacearum species complex (Rssc) cause bacterial wilt, a devastating plant disease that affects numerous economically important crops. Like other bacterial pests, Rssc injects a cocktail of effector proteins via the bacterial type III secretion system into host cells that collectively promote disease. Given their functional relevance in disease, the identification of Rssc effectors and the investigation of their in planta function are likely to provide clues on how to generate pest-resistant crop plants. Accordingly, molecular analysis of effector function is a focus of Rssc research. The elucidation of effector function requires corresponding gene knockout strains or strains that express the desired effector variants. The cloning of DNA constructs that facilitate the generation of such strains has hindered the investigation of Rssc effectors. To overcome these limitations, we have designed, generated and functionally validated a toolkit consisting of DNA modules that can be assembled via Golden-Gate (GG) cloning into either desired gene knockout constructs or multi-cassette expression constructs. The Ralstonia-GG-kit is compatible with a previously established toolkit that facilitates the generation of DNA constructs for in planta expression. Accordingly, cloned modules, encoding effectors of interest, can be transferred to vectors for expression in Rssc strains and plant cells. As many effector genes have been cloned in the past as GATEWAY entry vectors, we have also established a conversion vector that allows the implementation of GATEWAY entry vectors into the Ralstonia-GG-kit. In summary, the Ralstonia-GG-kit provides a valuable tool for the genetic investigation of genes encoding effectors and other Rssc genes.

摘要

雷尔氏菌复合种(Ralstonia solanacearum species complex,Rssc)的成员会引起细菌性萎蔫病,这是一种破坏性的植物疾病,会影响许多经济上重要的作物。与其他细菌害虫一样,Rssc 通过细菌 III 型分泌系统将效应蛋白混合物注入宿主细胞,共同促进疾病的发生。鉴于它们在疾病中的功能相关性,鉴定 Rssc 效应子并研究其在植物体内的功能可能为如何生成抗虫害作物植物提供线索。因此,效应子功能的分子分析是 Rssc 研究的重点。效应子功能的阐明需要相应的基因敲除菌株或表达所需效应子变体的菌株。有助于生成此类菌株的 DNA 构建体的克隆阻碍了对 Rssc 效应子的研究。为了克服这些限制,我们设计、生成并功能验证了一个由 DNA 模块组成的工具包,这些模块可以通过 Golden-Gate (GG) 克隆组装到所需的基因敲除构建体或多盒表达构建体中。Ralstonia-GG 工具包与先前建立的工具包兼容,该工具包有助于生成用于植物体内表达的 DNA 构建体。因此,可以将编码感兴趣的效应子的克隆模块转移到用于在 Rssc 菌株和植物细胞中表达的载体上。由于过去已经克隆了许多效应基因作为 GATEWAY 入口载体,我们还建立了一个转换载体,允许将 GATEWAY 入口载体转化为 Ralstonia-GG 工具包。总之,Ralstonia-GG 工具包为遗传研究编码效应子和其他 Rssc 基因的基因提供了有价值的工具。

相似文献

1
A modular toolbox for Golden-Gate-based plasmid assembly streamlines the generation of Ralstonia solanacearum species complex knockout strains and multi-cassette complementation constructs.基于 Golden-Gate 的质粒组装模块化工具包简化了青枯菌物种复合体敲除菌株和多盒互补构建体的生成。
Mol Plant Pathol. 2018 Jun;19(6):1511-1522. doi: 10.1111/mpp.12632. Epub 2018 Feb 1.
2
In Vitro and In Vivo Secretion/Translocation Assays to Identify Novel Ralstonia solanacearum Type 3 Effectors.用于鉴定青枯雷尔氏菌新型三型效应蛋白的体外和体内分泌/转位分析
Methods Mol Biol. 2018;1734:209-222. doi: 10.1007/978-1-4939-7604-1_17.
3
Validating Methods To Eradicate Plant-Pathogenic Ralstonia Strains Reveals that Growth Increases Bacterial Stress Tolerance.验证根除植物病原菌罗尔斯顿氏菌菌株的方法表明,生长会增加细菌的应激耐受力。
Microbiol Spectr. 2022 Dec 21;10(6):e0227022. doi: 10.1128/spectrum.02270-22. Epub 2022 Dec 1.
4
Specific Reconstruction on pRC Plasmid to Facilitate Its Universal Chromosomal Integration in Different Species Complex Strains.针对 pRC 质粒进行特定改造,以促进其在不同种系复杂株中的普遍染色体整合。
Mol Plant Microbe Interact. 2019 Sep;32(9):1063-1066. doi: 10.1094/MPMI-01-19-0004-LE. Epub 2019 Jul 29.
5
The eggplant AG91-25 recognizes the Type III-secreted effector RipAX2 to trigger resistance to bacterial wilt (Ralstonia solanacearum species complex).茄子 AG91-25 识别 III 型分泌效应物 RipAX2 以触发对青枯病(茄科劳尔氏菌复合种)的抗性。
Mol Plant Pathol. 2018 Nov;19(11):2459-2472. doi: 10.1111/mpp.12724. Epub 2018 Oct 16.
6
A pangenomic atlas reveals eco-evolutionary dynamics that shape type VI secretion systems in plant-pathogenic .一个泛基因组图谱揭示了塑造植物病原物 VI 型分泌系统的生态进化动态。
mBio. 2024 Oct 16;15(10):e0032324. doi: 10.1128/mbio.00323-24. Epub 2024 Aug 27.
7
[Advances in studies of the type III secretion system in Ralstonia solanacearum--A review].[青枯雷尔氏菌III型分泌系统的研究进展——综述]
Wei Sheng Wu Xue Bao. 2015 Jun 4;55(6):675-82.
8
[Regulation of rsc1285 gene in type III secretion system in Ralstonia solanacearum].[青枯雷尔氏菌III型分泌系统中rsc1285基因的调控]
Wei Sheng Wu Xue Bao. 2015 Aug 4;55(8):1010-7.
9
New Multilocus Variable-Number Tandem-Repeat Analysis (MLVA) Scheme for Fine-Scale Monitoring and Microevolution-Related Study of Ralstonia pseudosolanacearum Phylotype I Populations.用于青枯雷尔氏菌I型种群精细监测和微进化相关研究的新型多位点可变数目串联重复序列分析(MLVA)方案
Appl Environ Microbiol. 2017 Feb 15;83(5). doi: 10.1128/AEM.03095-16. Print 2017 Mar 1.
10
Expression of Ralstonia solanacearum type III secretion system is dependent on a novel type 4 pili (T4P) assembly protein (TapV) but is T4P independent.青枯雷尔氏菌 III 型分泌系统的表达依赖于一种新型的 IV 型菌毛(T4P)组装蛋白(TapV),但不依赖于 T4P。
Mol Plant Pathol. 2020 Jun;21(6):777-793. doi: 10.1111/mpp.12930. Epub 2020 Mar 20.

引用本文的文献

1
A Golden Gate compatible system for continuous directed evolution in .一种用于在……中进行连续定向进化的金门兼容系统。 (原文结尾处“in.”后面似乎缺失了具体内容)
Synth Biol (Oxf). 2025 Jul 23;10(1):ysaf014. doi: 10.1093/synbio/ysaf014. eCollection 2025.
2
Assembling DNA Plasmids with the Multi-Kingdom (MK) Cloning System.利用多领域(MK)克隆系统组装 DNA 质粒。
Methods Mol Biol. 2025;2850:467-479. doi: 10.1007/978-1-0716-4220-7_26.
3
Golden Gate Cloning of Multigene Constructs Using the Modular Cloning System MoClo.利用模块化克隆系统 MoClo 进行多基因构建体的金门克隆。
Methods Mol Biol. 2025;2850:21-39. doi: 10.1007/978-1-0716-4220-7_2.
4
A modular toolkit for environmental , , and enables complex metabolic manipulation.模块化工具包用于环境、代谢和遗传工程,实现复杂的代谢操作。
Appl Environ Microbiol. 2024 Aug 21;90(8):e0034024. doi: 10.1128/aem.00340-24. Epub 2024 Jul 31.
5
A User's Guide to Golden Gate Cloning Methods and Standards.金标准克隆方法及应用用户指南
ACS Synth Biol. 2022 Nov 18;11(11):3551-3563. doi: 10.1021/acssynbio.2c00355. Epub 2022 Nov 2.
6
An improved, versatile and efficient modular plasmid assembly system for expression analyses of genes in Xanthomonas oryzae.一种改进的、通用的、高效的模块化质粒组装系统,用于分析稻黄单胞菌中基因的表达。
Mol Plant Pathol. 2021 Apr;22(4):480-492. doi: 10.1111/mpp.13033. Epub 2021 Jan 24.
7
Identification of RipAZ1 as an avirulence determinant of Ralstonia solanacearum in Solanum americanum.鉴定出 RipAZ1 是茄科雷尔氏菌在美洲茄中的无毒决定因子。
Mol Plant Pathol. 2021 Mar;22(3):317-333. doi: 10.1111/mpp.13030. Epub 2021 Jan 3.
8
Golden Gate vectors for efficient gene fusion and gene deletion in diverse filamentous fungi.金葡菌载体在多种丝状真菌中高效进行基因融合和基因缺失。
Curr Genet. 2021 Apr;67(2):317-330. doi: 10.1007/s00294-020-01143-2. Epub 2020 Dec 24.
9
Creation of Golden Gate constructs for gene doctoring.基因修饰的金门构建体的构建。
BMC Biotechnol. 2020 Oct 7;20(1):54. doi: 10.1186/s12896-020-00648-5.
10
Enabling one-pot Golden Gate assemblies of unprecedented complexity using data-optimized assembly design.利用数据优化的组装设计实现前所未有的复杂程度的一锅式 Golden Gate 组装。
PLoS One. 2020 Sep 2;15(9):e0238592. doi: 10.1371/journal.pone.0238592. eCollection 2020.

本文引用的文献

1
Genomic and proteomic evidence supporting the division of the plant pathogen Ralstonia solanacearum into three species.支持将植物病原菌青枯雷尔氏菌划分为三个物种的基因组学和蛋白质组学证据。
BMC Genomics. 2016 Feb 1;17:90. doi: 10.1186/s12864-016-2413-z.
2
Comparative genomic analysis of Ralstonia solanacearum reveals candidate genes for host specificity.青枯雷尔氏菌的比较基因组分析揭示了宿主特异性的候选基因。
BMC Genomics. 2015 Apr 8;16(1):270. doi: 10.1186/s12864-015-1474-8.
3
Polyphasic taxonomic revision of the Ralstonia solanacearum species complex: proposal to emend the descriptions of Ralstonia solanacearum and Ralstonia syzygii and reclassify current R. syzygii strains as Ralstonia syzygii subsp. syzygii subsp. nov., R. solanacearum phylotype IV strains as Ralstonia syzygii subsp. indonesiensis subsp. nov., banana blood disease bacterium strains as Ralstonia syzygii subsp. celebesensis subsp. nov. and R. solanacearum phylotype I and III strains as Ralstonia pseudosolanacearum sp. nov.多相分类修订罗尔斯顿氏菌复合种:建议修正罗尔斯顿氏菌和罗尔斯顿氏西利西亚菌的描述,并将当前的罗尔斯顿氏西利西亚菌菌株重新分类为罗尔斯顿氏西利西亚菌亚种。西利西亚亚种。新,罗尔斯顿氏菌 IV 型菌系为罗尔斯顿氏菌亚种。印度尼西亚亚种。新,香蕉血病菌系为罗尔斯顿氏菌亚种。新,西里伯斯亚种和罗尔斯顿氏菌 I 型和 III 型菌系为罗尔斯顿氏假茄科菌。新。
Int J Syst Evol Microbiol. 2014 Sep;64(Pt 9):3087-3103. doi: 10.1099/ijs.0.066712-0. Epub 2014 Jun 18.
4
Opening the Ralstonia solanacearum type III effector tool box: insights into host cell subversion mechanisms.开启青枯雷尔氏菌III型效应蛋白工具箱:深入了解宿主细胞颠覆机制。
Curr Opin Plant Biol. 2014 Aug;20:110-7. doi: 10.1016/j.pbi.2014.05.002. Epub 2014 May 29.
5
A modular plasmid assembly kit for multigene expression, gene silencing and silencing rescue in plants.一种用于植物多基因表达、基因沉默和沉默拯救的模块化质粒组装试剂盒。
PLoS One. 2014 Feb 13;9(2):e88218. doi: 10.1371/journal.pone.0088218. eCollection 2014.
6
HpaP modulates type III effector secretion in Ralstonia solanacearum and harbours a substrate specificity switch domain essential for virulence.HpaP调节青枯雷尔氏菌III型效应蛋白的分泌,并含有一个对毒力至关重要的底物特异性转换结构域。
Mol Plant Pathol. 2014 Aug;15(6):601-14. doi: 10.1111/mpp.12119. Epub 2014 Feb 19.
7
Nitrate assimilation contributes to Ralstonia solanacearum root attachment, stem colonization, and virulence.硝酸盐同化作用有助于青枯菌附着根部、定殖茎部并增强其毒性。
J Bacteriol. 2014 Mar;196(5):949-60. doi: 10.1128/JB.01378-13. Epub 2013 Dec 20.
8
Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex.雷尔氏菌属物种复合体中 III 型效应子基因簇的库、统一命名法和进化。
BMC Genomics. 2013 Dec 6;14:859. doi: 10.1186/1471-2164-14-859.
9
A novel, sensitive method to evaluate potato germplasm for bacterial wilt resistance using a luminescent Ralstonia solanacearum reporter strain.一种利用发光型青枯雷尔氏菌报告菌株评估马铃薯种质资源对青枯病抗性的新的、敏感的方法。
Mol Plant Microbe Interact. 2014 Mar;27(3):277-85. doi: 10.1094/MPMI-10-13-0303-FI.
10
Ralstonia solanacearum requires PopS, an ancient AvrE-family effector, for virulence and To overcome salicylic acid-mediated defenses during tomato pathogenesis.青枯雷尔氏菌需要 PopS,一种古老的 AvrE 家族效应子,来发挥毒性,并在番茄发病过程中克服水杨酸介导的防御。
mBio. 2013 Nov 26;4(6):e00875-13. doi: 10.1128/mBio.00875-13.