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加拿大安大略省从奶山羊和奶绵羊中分离出的亚种菌株的鉴定。

Identification of subspecies strains isolated from dairy goats and dairy sheep in Ontario, Canada.

作者信息

Bauman Cathy A, Jones-Bitton Andria, Ahlstrom Christina, Mutharia Lucy, De Buck Jeroen, Jansen Jocelyn, Kelton David, Menzies Paula

机构信息

Department of Population Medicine, University of Guelph, Ontario N1G 2W1 (Bauman, Jones-Bitton, Kelton, Menzies); Department of Production Animal Health, University of Calgary, Alberta T2N 1N4 (Ahlstrom, De Buck); Department of Molecular and Cellular Biology, University of Guelph, Ontario N1G 2W1 (Mutharia); Veterinary Science Unit, Animal Health and Welfare Branch, Ontario Ministry of Agriculture, Food and Rural Affairs (Jansen).

出版信息

Can J Vet Res. 2017 Oct;81(4):304-307.

PMID:29081589
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5644444/
Abstract

The main objective of this study was to identify the circulating strains of subspecies (Map) in fecal isolates obtained from dairy goat (N = 29 farms) and dairy sheep (N = 21 farms) populations in Ontario, Canada. Further subtyping was performed to determine if there was adequate diversity between strains that could be used to establish Map transmission patterns. Type C was the dominant strain of Map isolates (95.2%) identified in dairy goats ( = 21). Sub-typing of the Type C strains, based on variable number tandem repeats (VNTR) and mycobacterial interspersed repetitive units, identified 3 VNTR types: INMV 1 ( = 10), INMV 2 ( = 10), and a type not previously identified ( = 1). Only 2 sheep isolates could be identified; both were Type S, sub-type III. Current typing methods demonstrate little Map diversity in the dairy goat population and are therefore of limited use to investigate infection patterns.

摘要

本研究的主要目的是在加拿大安大略省的奶山羊(N = 29个养殖场)和奶绵羊(N = 21个养殖场)群体的粪便分离物中鉴定副结核分枝杆菌亚种(Map)的流行菌株。进行了进一步的亚型分析,以确定菌株之间是否存在足够的多样性,可用于建立Map的传播模式。C型是在奶山羊(n = 21)中鉴定出的Map分离株的主要菌株(95.2%)。基于可变数目串联重复序列(VNTR)和分枝杆菌散布重复单元对C型菌株进行亚型分析,鉴定出3种VNTR类型:INMV 1(n = 10)、INMV 2(n = 10)和一种先前未鉴定的类型(n = 1)。仅鉴定出两株绵羊分离株;均为S型,III亚型。目前的分型方法表明奶山羊群体中Map的多样性很小,因此在调查感染模式方面用途有限。

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本文引用的文献

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BMC Vet Res. 2016 Sep 20;12:212. doi: 10.1186/s12917-016-0814-5.
2
Relative frequency of 4 major strain types of Mycobacterium avium ssp. paratuberculosis in Canadian dairy herds using a novel single nucleotide polymorphism-based polymerase chain reaction.使用基于单核苷酸多态性的新型聚合酶链反应检测加拿大奶牛群中鸟分枝杆菌副结核亚种4种主要菌株类型的相对频率
J Dairy Sci. 2016 Oct;99(10):8297-8303. doi: 10.3168/jds.2016-11397. Epub 2016 Aug 4.
3
Prevalence of paratuberculosis in the dairy goat and dairy sheep industries in Ontario, Canada.加拿大安大略省奶山羊和奶绵羊产业中副结核病的流行情况。
Can Vet J. 2016 Feb;57(2):169-75.
4
Genetic diversity of Mycobacterium avium subspecies paratuberculosis and the influence of strain type on infection and pathogenesis: a review.鸟分枝杆菌副结核亚种的遗传多样性及菌株类型对感染和发病机制的影响:综述
Vet Res. 2015 Jun 19;46(1):64. doi: 10.1186/s13567-015-0203-2.
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