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新属酪解奈莫氏菌属,新种酪解奈莫氏菌,从森林土壤中分离得到。

Nemorella caseinilytica gen. nov., sp. nov., isolated from forest soil.

作者信息

Chaudhary Dhiraj Kumar, Dahal Ram Hari, Kim Jaisoo

机构信息

Department of Life Science, College of Natural Sciences and Engineering, Kyonggi University, Suwon, Gyeonggi-Do 16227, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2018 Feb;68(2):474-481. doi: 10.1099/ijsem.0.002427. Epub 2017 Nov 15.

Abstract

Two novel strains, J116-2 and J116-1, were isolated from forest soil and were taxonomically characterized by a polyphasic approach. Both strains were yellow-coloured, Gram-stain-negative, strictly aerobic, non-motile and rod-shaped bacteria. The strains were non-sporulating, catalase-positive and oxidase-negative. Strains J116-2 and J116-1 were able to grow at 20-32 °C, pH 6.0-8.5, and 0-0.5 % (w/v) NaCl concentration. Based on 16S rRNA gene sequence analyses, strains J116-2 and J116-1 formed a distinct lineage within the family Chitinophagaceae of the phylum Bacteroidetes and were closely related to genera Taibaiella (89.86-89.30 % sequence similarity), Falvihumibacter (89.20-89.06 %), Filimonas (89.06 %) and Chitinophaga(89.01-88.77 %). The pairwise sequence similarity between strains J116-2 and J116-1 was found to be 99.86 %. Flexirubin-type pigments were absent in both strains. The only respiratory quinone was menaquinone-7 (MK-7); the major polar lipid was phosphatidylethanolamine; the predominant polyamine was homospermidine; and the major fatty acids were C15 : 0iso, C15 : 1iso G and C17 : 0iso 3-OH. The genomic DNA G+C content values of strains J116-2 and J116-1 were 51.1 and 50.9 mol%, respectively. On the basis of phenotypic, genotypic and phylogenetic analysis, strain J116-2 represents a novel species of a new genus in the family Chitinophagaceae, for which the name Nemorella caseinilytica gen. nov., sp. nov. is proposed. The type strain of Nemorella caseinilytica is J116-2 (=KEMB 9005-550=KACC 19168=NBRC 112827).

摘要

从森林土壤中分离出两株新菌株J116 - 2和J116 - 1,并采用多相分类法对其进行分类学特征鉴定。两株菌株均为黄色、革兰氏染色阴性、严格需氧、无运动性的杆状细菌。这些菌株不产芽孢,过氧化氢酶阳性,氧化酶阴性。菌株J116 - 2和J116 - 1能够在20 - 32°C、pH值6.0 - 8.5和0 - 0.5%(w/v)的NaCl浓度下生长。基于16S rRNA基因序列分析,菌株J116 - 2和J116 - 1在拟杆菌门噬几丁质菌科内形成一个独特的分支,与太白菌属(序列相似性为89.86 - 89.30%)、黄腐泥杆菌属(89.20 - 89.06%)、丝单胞菌属(89.06%)和噬几丁质菌属(89.01 - 88.77%)密切相关。菌株J116 - 2和J116 - 1之间的成对序列相似性为99.86%。两株菌株均无flexirubin型色素。唯一的呼吸醌是甲基萘醌-7(MK - 7);主要极性脂是磷脂酰乙醇胺;主要多胺是高亚精胺;主要脂肪酸是C15 : 0iso、C15 : 1iso G和C17 : 0iso 3 - OH。菌株J116 - 2和J116 - 1的基因组DNA G + C含量值分别为51.1和50.9 mol%。基于表型、基因型和系统发育分析,菌株J116 - 2代表噬几丁质菌科一个新属的一个新物种,为此提出新属名为溶酪新鞘菌属(Nomorella caseinilytica),新种名为溶酪新鞘菌(Nomorella caseinilytica)。溶酪新鞘菌的模式菌株为J116 - 2(=KEMB 9005 - 550 = KACC 19168 = NBRC 112827)。

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