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柱形珊瑚栖珊瑚溶杆菌新属新种,从造礁珊瑚鹿角杯形珊瑚中分离出的溶杆菌科新成员

Coralloluteibacterium stylophorae gen. nov., sp. nov., a new member of the family Lysobacteraceae isolated from the reef-building coral Stylophora sp.

作者信息

Chen Wen-Ming, Xie Pei-Bei, Tang Sen-Lin, Sheu Shih-Yi

机构信息

Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung Marine University, No. 142, Hai-Chuan Rd. Nan-Tzu, Kaohsiung, 811, Taiwan, ROC.

Department of Marine Biotechnology, National Kaohsiung Marine University, No. 142, Hai-Chuan Rd. Nan-Tzu, Kaohsiung, 811, Taiwan, ROC.

出版信息

Arch Microbiol. 2018 Apr;200(3):473-481. doi: 10.1007/s00203-017-1458-y. Epub 2017 Nov 30.

Abstract

A bacterial strain, designated Sty a-1, was isolated from a reef-building coral Stylophora sp., collected off coast of Southern Taiwan and characterized using the polyphasic taxonomy approach. Cells of strain Sty a-1 were Gram-staining-negative, aerobic, poly-β-hydroxybutyrate accumulating, motile by means of flagella, non-spore forming, straight rod-shaped and colonies were yellow and circular. Growth occurred at 15-40 °C (optimum, 30-35 °C), at pH 6-10 (optimum, pH 6.5-8) and with 0-7% NaCl (optimum, 2-3%). The predominant fatty acids were iso-C, iso-C ω9c, summed feature 3 (comprising C ω7c and/or C ω6c) and iso-C. The major isoprenoid quinone was Q-8 and the DNA G+C content was 68.5 mol%. The polar lipid profile consisted of a mixture of phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, an uncharacterized aminophospholipid and three uncharacterized lipids. The major polyamines were spermidine, putrescine and homospermidine. Phylogenetic analyses based on 16S rRNA and four housekeeping gene sequences (recA, atpD, rpoA and rpoB) showed that strain Sty a-1 forms a distinct lineage with respect to closely related genera in the family Lysobacteraceae, most closely related to Lysobacter, Silanimonas, Arenimonas and Luteimonas and the levels of 16S rRNA gene sequence similarity with respect to the type species of related genera are less than 95%. On the basis of the genotypic and phenotypic data, strain Sty a-1 represents a novel genus and species of the family Lysobacteraceae, for which the name Coralloluteibacterium stylophorae gen. nov., sp. nov. is proposed. The type strain is Sty a-1 (= BCRC 80968 = LMG 29479 = KCTC 52167).

摘要

从台湾南部沿海采集的造礁珊瑚鹿角杯形珊瑚(Stylophora sp.)中分离出一株名为Sty a-1的细菌菌株,并采用多相分类法对其进行了特征描述。菌株Sty a-1的细胞革兰氏染色阴性,好氧,能积累聚-β-羟基丁酸酯,通过鞭毛运动,不形成芽孢,呈直杆状,菌落为黄色圆形。在15-40℃(最适温度为30-35℃)、pH值6-10(最适pH值为6.5-8)和0-7% NaCl(最适浓度为2-3%)的条件下生长。主要脂肪酸为异-C、异-C ω9c、总和特征3(包含C ω7c和/或C ω6c)以及异-C。主要类异戊二烯醌为Q-8,DNA G+C含量为68.5 mol%。极性脂质谱由磷脂酰乙醇胺、磷脂酰甘油、磷脂酰胆碱、二磷脂酰甘油、一种未鉴定的氨基磷脂和三种未鉴定的脂质组成。主要多胺为亚精胺、腐胺和高亚精胺。基于16S rRNA和四个管家基因序列(recA、atpD、rpoA和rpoB)的系统发育分析表明,菌株Sty a-1在溶杆菌科中与密切相关的属形成了一个独特的谱系,与溶杆菌属、沙栖菌属、沙海杆菌属和黄色单胞菌属关系最为密切,与相关属模式种的16S rRNA基因序列相似性水平低于95%。基于基因型和表型数据,菌株Sty a-1代表溶杆菌科的一个新属和新种,为此提出新属名珊瑚黄色杆菌属(Coralloluteibacterium),新种名Stylophorae珊瑚黄色杆菌(Coralloluteibacterium stylophorae)。模式菌株为Sty a-1(= BCRC 80968 = LMG 29479 = KCTC 52167)。

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