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细胞外囊泡蛋白质组学展望

A Perspective on Extracellular Vesicles Proteomics.

作者信息

Rosa-Fernandes Livia, Rocha Victória Bombarda, Carregari Victor Corasolla, Urbani Andrea, Palmisano Giuseppe

机构信息

GlycoProteomics Laboratory, Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil.

Proteomic and Metabonomic Laboratory, Fondazione Santa Lucia, Rome, Italy.

出版信息

Front Chem. 2017 Nov 21;5:102. doi: 10.3389/fchem.2017.00102. eCollection 2017.

Abstract

Increasing attention has been given to secreted extracellular vesicles (EVs) in the past decades, especially in the portrayal of their molecular cargo and role as messengers in both homeostasis and pathophysiological conditions. This review presents the state-of-the-art proteomic technologies to identify and quantify EVs proteins along with their PTMs, interacting partners and structural details. The rapid growth of mass spectrometry-based analytical strategies for protein sequencing, PTMs and structural characterization has improved the level of molecular details that can be achieved from limited amount of EVs isolated from different biological sources. Here we will provide a perspective view on the achievements and challenges on EVs proteome characterization using mass spectrometry. A detailed bioinformatics approach will help us to picture the molecular fingerprint of EVs and understand better their pathophysiological function.

摘要

在过去几十年里,分泌型细胞外囊泡(EVs)受到了越来越多的关注,尤其是在描述其分子载荷以及在稳态和病理生理条件下作为信使的作用方面。本综述介绍了用于鉴定和定量EVs蛋白质及其翻译后修饰(PTMs)、相互作用伙伴和结构细节的最新蛋白质组学技术。基于质谱的蛋白质测序、PTMs和结构表征分析策略的迅速发展,提高了从不同生物来源分离得到的有限量EVs所能实现的分子细节水平。在这里,我们将对使用质谱进行EVs蛋白质组表征的成就和挑战提供一个前瞻性的观点。详细的生物信息学方法将帮助我们描绘出EVs的分子指纹,并更好地理解其病理生理功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae99/5702361/323991586abf/fchem-05-00102-g0001.jpg

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