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一个远端环控制细胞色素P450脱羧酶中的产物释放以及化学选择性和区域选择性。

A Distal Loop Controls Product Release and Chemo- and Regioselectivity in Cytochrome P450 Decarboxylases.

作者信息

Amaya José A, Rutland Cooper D, Leschinsky Nicholas, Makris Thomas M

机构信息

Department of Chemistry and Biochemistry, University of South Carolina , Columbia, South Carolina 29208, United States.

出版信息

Biochemistry. 2018 Jan 23;57(3):344-353. doi: 10.1021/acs.biochem.7b01065. Epub 2017 Dec 19.

Abstract

Cytochrome P450 OleT utilizes hydrogen peroxide (HO) to catalyze the decarboxylation or hydroxylation of fatty acid (FA) substrates. Both reactions are initiated through the abstraction of a substrate hydrogen atom by the high-valent iron-oxo intermediate known as Compound I. Here, we specifically probe the influence of substrate coordination on OleT reaction partitioning through the combined use of fluorescent and electron paramagnetic resonance (EPR)-active FA probes and mutagenesis of a structurally disordered F-G loop that is distal from the heme-iron active site. Both probes are efficiently metabolized by OleT and efficiently trigger the formation of Compound I. Transient fluorescence and EPR reveal a slow product release step, mediated by the F-G loop, that limits OleT turnover. A single-amino acid change or excision of the loop reveals that this region establishes critical interactions to anchor FA substrates in place. The stabilization afforded by the F-G loop is essential for regulating regiospecific C-H abstraction and allowing for efficient decarboxylation to occur. These results highlight a regulatory strategy whereby the fate of activated oxygen species can be controlled at distances far removed from the site of chemistry.

摘要

细胞色素P450 OleT利用过氧化氢(HO)催化脂肪酸(FA)底物的脱羧或羟基化反应。这两种反应均通过被称为化合物I的高价铁氧中间体夺取底物氢原子而启动。在此,我们通过联合使用荧光和电子顺磁共振(EPR)活性FA探针以及对远离血红素铁活性位点的结构无序F-G环进行诱变,专门探究底物配位对OleT反应分配的影响。两种探针均能被OleT有效代谢,并有效触发化合物I的形成。瞬态荧光和EPR显示,由F-G环介导的产物释放步骤缓慢,这限制了OleT的周转。该环的单个氨基酸变化或切除表明,该区域建立了关键相互作用以将FA底物固定到位。F-G环提供的稳定作用对于调节区域特异性C-H夺取以及使有效脱羧反应发生至关重要。这些结果突出了一种调节策略,即活性氧物种的命运可在远离化学反应位点的距离处得到控制。

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