Katharios Pantelis, Kalatzis Panos G, Kokkari Constantina, Sarropoulou Elena, Middelboe Mathias
Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Crete, Greece.
Marine Biological Section, University of Copenhagen, Helsingør, Denmark.
PLoS One. 2017 Dec 28;12(12):e0190083. doi: 10.1371/journal.pone.0190083. eCollection 2017.
A novel virulent bacteriophage, vB_VspP_pVa5, infecting a strain of Vibrio splendidus was isolated from a sea-cage aquaculture farm in Greece, and characterized using microbiological methods and genomic analysis. Bacteriophage vB_VspP_pVa5 is a N4-like podovirus with an icosahedral head measuring 85 nm in length and a short non-contractile tail. The phage had a narrow host range infecting only the bacterial host, a latent period of 30 min and a burst size of 24 virions per infected bacterium. Its genome size was 78,145 bp and genomic analysis identified 107 densely-packed genes, 40 of which could be annotated. In addition to the very large virion encapsulated DNA-dependent RNA polymerase which is the signature of the N4-like genus, an interesting feature of the novel phage is the presence of a self-splicing group I intron in the thymidylate synthase gene. A tRNAStop interrupted by a ~2.5kb open reading frame-containing area was also identified. The absence of genes related to lysogeny along with the high efficacy observed during in vitro cell lysis trials, indicate that the vB_VspP_pVa5 is a potential candidate component in a bacteriophage cocktail suitable for the biological control of V. splendidus in aquaculture.
从希腊的一个海水网箱养殖场分离出一种新型烈性噬菌体vB_VspP_pVa5,它可感染灿烂弧菌菌株,并采用微生物学方法和基因组分析对其进行了表征。噬菌体vB_VspP_pVa5是一种N4样的短尾病毒,其二十面体头部长度为85纳米,尾部短且不可收缩。该噬菌体宿主范围狭窄,仅感染细菌宿主,潜伏期为30分钟,每个被感染细菌的爆发量为24个病毒粒子。其基因组大小为78,145碱基对,基因组分析确定了107个紧密排列的基因,其中40个基因可以注释。除了具有N4样属标志性的非常大的病毒体包裹的依赖DNA的RNA聚合酶外,这种新型噬菌体的一个有趣特征是胸苷酸合成酶基因中存在一个自我剪接的I类内含子。还鉴定出一个被约2.5kb含开放阅读框区域中断的tRNAStop。缺乏与溶原性相关的基因以及在体外细胞裂解试验中观察到的高效性,表明vB_VspP_pVa5是一种潜在的候选成分,可用于适合水产养殖中灿烂弧菌生物防治的噬菌体混合物。