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细菌酶 I(EI)的寡聚状态决定了 EI 对 α-酮戊二酸的变构刺激或竞争性抑制。

The oligomerization state of bacterial enzyme I (EI) determines EI's allosteric stimulation or competitive inhibition by α-ketoglutarate.

机构信息

From the Department of Chemistry and.

the Laboratory of Molecular Biology, NIDDK, National Institutes of Health, Bethesda, Maryland 20892.

出版信息

J Biol Chem. 2018 Feb 16;293(7):2631-2639. doi: 10.1074/jbc.RA117.001466. Epub 2018 Jan 9.

Abstract

The bacterial phosphotransferase system (PTS) is a signal transduction pathway that couples phosphoryl transfer to active sugar transport across the cell membrane. The PTS is initiated by phosphorylation of enzyme I (EI) by phosphoenolpyruvate (PEP). The EI phosphorylation state determines the phosphorylation states of all other PTS components and is thought to play a central role in the regulation of several metabolic pathways and to control the biology of bacterial cells at multiple levels, for example, affecting virulence and biofilm formation. Given the pivotal role of EI in bacterial metabolism, an improved understanding of the mechanisms controlling its activity could inform future strategies for bioengineering and antimicrobial design. Here, we report an enzymatic assay, based on Selective Optimized Flip Angle Short Transient (SOFAST) NMR experiments, to investigate the effect of the small-molecule metabolite α-ketoglutarate (αKG) on the kinetics of the EI-catalyzed phosphoryl transfer reaction. We show that at experimental conditions favoring the monomeric form of EI, αKG promotes dimerization and acts as an allosteric stimulator of the enzyme. However, when the oligomerization state of EI is shifted toward the dimeric species, αKG functions as a competitive inhibitor of EI. We developed a kinetic model that fully accounted for the experimental data and indicated that bacterial cells might use the observed interplay between allosteric stimulation and competitive inhibition of EI by αKG to respond to physiological fluctuations in the intracellular environment. We expect that the mechanism for regulating EI activity revealed here is common to several other oligomeric enzymes.

摘要

细菌磷酸转移酶系统 (PTS) 是一种信号转导途径,它将磷酸基团转移与跨细胞膜的活性糖运输偶联。PTS 由磷酸烯醇丙酮酸 (PEP) 磷酸化酶 I (EI) 启动。EI 的磷酸化状态决定了所有其他 PTS 成分的磷酸化状态,被认为在调节几种代谢途径中发挥核心作用,并在多个层次上控制细菌细胞的生物学特性,例如,影响毒力和生物膜形成。鉴于 EI 在细菌代谢中的关键作用,对控制其活性的机制有更深入的了解,可以为生物工程和抗菌药物设计提供信息。在这里,我们报告了一种基于选择性优化翻转角短瞬(SOFAST)NMR 实验的酶促测定法,以研究小分子代谢物α-酮戊二酸(αKG)对 EI 催化的磷酸转移反应动力学的影响。我们表明,在有利于 EI 单体形式的实验条件下,αKG 促进二聚体形成,并作为酶的变构激活剂。然而,当 EI 的寡聚状态向二聚体物种转变时,αKG 作为 EI 的竞争性抑制剂发挥作用。我们开发了一个动力学模型,该模型充分解释了实验数据,并表明细菌细胞可能利用观察到的 EI 与 αKG 之间的变构刺激和竞争抑制之间的相互作用,对细胞内环境的生理波动做出反应。我们期望这里揭示的调节 EI 活性的机制在其他几种寡聚酶中是常见的。

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