Choudhary Neha, Singh Vikram
Centre for Computational Biology and Bioinformatics, School of Life Sciences, Central University of Himachal Pradesh, Himachal Pradesh, India.
PLoS One. 2018 Jan 10;13(1):e0191006. doi: 10.1371/journal.pone.0191006. eCollection 2018.
Piper longum (P. longum, also called as long pepper) is one of the common culinary herbs that has been extensively used as a crucial constituent in various indigenous medicines, specifically in traditional Indian medicinal system known as Ayurveda. For exploring the comprehensive effect of its constituents in humans at proteomic and metabolic levels, we have reviewed all of its known phytochemicals and enquired about their regulatory potential against various protein targets by developing high-confidence tripartite networks consisting of phytochemical-protein target-disease association. We have also (i) studied immunomodulatory potency of this herb; (ii) developed subnetwork of human PPI regulated by its phytochemicals and could successfully associate its specific modules playing important role in diseases, and (iii) reported several novel drug targets. P10636 (microtubule-associated protein tau, that is involved in diseases like dementia etc.) was found to be the commonly screened target by about seventy percent of these phytochemicals. We report 20 drug-like phytochemicals in this herb, out of which 7 are found to be the potential regulators of 5 FDA approved drug targets. Multi-targeting capacity of 3 phytochemicals involved in neuroactive ligand receptor interaction pathway was further explored via molecular docking experiments. To investigate the molecular mechanism of P. longum's action against neurological disorders, we have developed a computational framework that can be easily extended to explore its healing potential against other diseases and can also be applied to scrutinize other indigenous herbs for drug-design studies.
荜茇(也称为长胡椒)是常见的烹饪香草之一,在各种本土药物中被广泛用作关键成分,尤其是在被称为阿育吠陀的传统印度医学体系中。为了在蛋白质组学和代谢水平上探索其成分对人类的综合作用,我们回顾了其所有已知的植物化学物质,并通过构建由植物化学物质 - 蛋白质靶点 - 疾病关联组成的高可信度三方网络,探究了它们对各种蛋白质靶点的调节潜力。我们还(i)研究了这种草药的免疫调节能力;(ii)构建了由其植物化学物质调节的人类蛋白质 - 蛋白质相互作用(PPI)子网,并成功将其在疾病中起重要作用的特定模块联系起来,以及(iii)报告了几个新的药物靶点。P10636(微管相关蛋白tau,参与痴呆等疾病)被发现是约70%的这些植物化学物质共同筛选的靶点。我们报告了这种草药中20种类药物的植物化学物质,其中7种被发现是5个美国食品药品监督管理局(FDA)批准的药物靶点的潜在调节剂。通过分子对接实验进一步探索了参与神经活性配体受体相互作用途径的3种植物化学物质的多靶点作用能力。为了研究荜茇对神经系统疾病作用的分子机制,我们开发了一个计算框架,该框架可以很容易地扩展以探索其对其他疾病的治疗潜力,也可应用于审查其他本土草药用于药物设计研究。