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基于纸张的 DNA 读取器,用于可视化定量检测土壤传播性蠕虫感染。

Paper-Based DNA Reader for Visualized Quantification of Soil-Transmitted Helminth Infections.

机构信息

Department of Cell Biology, National Research Center , Cairo, Egypt , 12622.

Microbiology Research Institute, National Autonomous University of Honduras , Tegucigalpa, Honduras.

出版信息

ACS Sens. 2018 Jan 26;3(1):205-210. doi: 10.1021/acssensors.7b00857. Epub 2018 Jan 16.

Abstract

Soil-transmitted helminth (STH) infections are a global health issue affecting nearly one-third of the world's population. As most endemic areas of STH are impoverished countries or regions with limited healthcare resources, the accurate diagnosis of STH requires analytical tools that are not only quantitative, but also portable, inexpensive, and with no or minimal demand for external instrument. Herein, we introduce a novel paper-based diagnostic device, termed quantitative paper-based DNA reader (qPDR), capable of quantifying STH at the molecular level by measuring distance as readout, thus eliminating the need for external readers. On the basis of the unique interfacial interaction of a DNA intercalating dye, SYBR Green I, with native cellulose on a chromatographic paper, qPDR allows the distance-based quantification of minute amounts of double-stranded DNA as short as 6 min. By integrating qPDR with polymerase chain reactions that were performed using a smartphone-controlled portable thermal cycler, we were able to quantify minute amount of genetic markers from adult worms of an STH (Trichuris trichiura) that were expelled post-treatment by infected children living in the rural areas of Honduras.

摘要

土壤传播性蠕虫(STH)感染是一个全球性的健康问题,影响了世界近三分之一的人口。由于 STH 的大多数流行地区都是医疗资源有限的贫困国家或地区,因此需要能够进行定量检测的分析工具,这些工具不仅要便携、廉价,而且无需或只需很少的外部仪器。在此,我们介绍了一种新型的基于纸张的诊断设备,称为定量基于纸张的 DNA 读取器(qPDR),它可以通过测量距离作为读出信号来实现 STH 的分子水平定量,从而消除对外部读取器的需求。基于 DNA 嵌入染料 SYBR Green I 与色谱纸上天然纤维素的独特界面相互作用,qPDR 允许对短至 6 分钟的极少量双链 DNA 进行基于距离的定量。通过将 qPDR 与智能手机控制的便携式热循环仪进行聚合酶链反应(PCR)整合,我们能够从感染后被排出的 STH(旋毛虫)成虫中定量检测出微量的遗传标记,这些 STH 是居住在洪都拉斯农村地区的受感染儿童排出的。

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