Unité de Biologie Moléculaire du Gène Chez les Extrêmophiles, Département de Microbiologie, Institut Pasteur, Paris, France
Department of Bioscience and Biotechnology, Faculty of Agriculture, Kyushu University, Fukuoka, Japan.
J Bacteriol. 2018 Mar 12;200(7). doi: 10.1128/JB.00580-17. Print 2018 Apr 1.
Clustered regularly interspaced short palindromic repeat (CRISPR)-Cas systems are well-known acquired immunity systems that are widespread in archaea and bacteria. The RNA-guided nucleases from CRISPR-Cas systems are currently regarded as the most reliable tools for genome editing and engineering. The first hint of their existence came in 1987, when an unusual repetitive DNA sequence, which subsequently was defined as a CRISPR, was discovered in the genome during an analysis of genes involved in phosphate metabolism. Similar sequence patterns were then reported in a range of other bacteria as well as in halophilic archaea, suggesting an important role for such evolutionarily conserved clusters of repeated sequences. A critical step toward functional characterization of the CRISPR-Cas systems was the recognition of a link between CRISPRs and the associated Cas proteins, which were initially hypothesized to be involved in DNA repair in hyperthermophilic archaea. Comparative genomics, structural biology, and advanced biochemistry could then work hand in hand, not only culminating in the explosion of genome editing tools based on CRISPR-Cas9 and other class II CRISPR-Cas systems but also providing insights into the origin and evolution of this system from mobile genetic elements denoted casposons. To celebrate the 30th anniversary of the discovery of CRISPR, this minireview briefly discusses the fascinating history of CRISPR-Cas systems, from the original observation of an enigmatic sequence in to genome editing in humans.
成簇规律间隔短回文重复序列 (CRISPR)-Cas 系统是一种广泛存在于古菌和细菌中的获得性免疫系统。CRISPR-Cas 系统的 RNA 指导的核酸酶目前被认为是基因组编辑和工程的最可靠工具。第一个关于它们存在的提示是在 1987 年,在分析参与磷酸盐代谢的基因时,在 基因组中发现了一种不寻常的重复 DNA 序列,随后将其定义为 CRISPR。随后在一系列其他细菌以及嗜盐古菌中也报道了类似的序列模式,表明这种进化上保守的重复序列簇具有重要作用。CRISPR-Cas 系统功能特征的关键步骤是认识到 CRISPR 与相关 Cas 蛋白之间的联系,最初假设 Cas 蛋白参与嗜热古菌的 DNA 修复。比较基因组学、结构生物学和高级生物化学可以携手合作,不仅促成了基于 CRISPR-Cas9 和其他 II 类 CRISPR-Cas 系统的基因组编辑工具的爆炸式发展,还提供了关于该系统从移动遗传元件(casposons)的起源和进化的见解。为了庆祝 CRISPR 发现 30 周年,这篇简评简要讨论了 CRISPR-Cas 系统从最初观察到的神秘序列到人类基因组编辑的迷人历史。