Izadi Fereshteh, Rezaei Tavirani Mostafa, Honarkar Zahra, Rostami-Nejad Mohammad
Basic and Molecular Epidemiology of Gastrointestinal Disorders Research Center, Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Proteomics Research Center, Shahid beheshti University of Medical Sciences, Tehran, Iran.
Gastroenterol Hepatol Bed Bench. 2017 Fall;10(4):303-310.
we mainly aimed to elucidate potential comorbidities between celiac disease and hepatitis c by means of data and network analysis approaches.
understanding the association among the disorders evidently has important impact on the diagnosis and therapeutic approaches. Celiac disease is the most challenging, common types of autoimmune disorders. On the other hand, hepatitis c virus genome products like some proteins are supposed to be resemble to gliadin types that in turn activates gluten intolerance in people with inclined to gluten susceptibilities. Moreover, a firm support of association between chronic hepatitis and celiac disease remains largely unclear. Henceforth exploring cross-talk among these diseases will apparently lead to the promising discoveries concerning important genes and regulators.
321 and 1032 genes associated with celiac disease and hepatitis c retrieved from DisGeNET were subjected to build a gene regulatory network. Afterward a network-driven integrative analysis was performed to exploring prognosticates genes and related pathways.
105 common genes between these diseases included 11 transcription factors were identified as hallmark molecules where by further screening enriched in biological GO terms and pathways chiefly in immune systems and signaling pathways such as chemokines, cytokines and interleukins.
in silico data analysis approaches indicated that the identified selected combinations of genes covered a wide range of known functions triggering the inflammation implicated in these diseases.
我们主要旨在通过数据和网络分析方法阐明乳糜泻和丙型肝炎之间潜在的共病情况。
了解这些疾病之间的关联显然对诊断和治疗方法具有重要影响。乳糜泻是自身免疫性疾病中最具挑战性、最常见的类型。另一方面,丙型肝炎病毒基因组产物如某些蛋白质被认为类似于麦醇溶蛋白类型,进而在易患麸质敏感的人群中激活麸质不耐受。此外,慢性肝炎与乳糜泻之间关联的有力证据在很大程度上仍不明确。因此,探索这些疾病之间的相互作用显然将带来有关重要基因和调节因子的有前景的发现。
从DisGeNET检索到的与乳糜泻和丙型肝炎相关的321个和1032个基因用于构建基因调控网络。随后进行网络驱动的综合分析以探索预后基因和相关通路。
这些疾病之间的105个共同基因包括11个转录因子被确定为标志性分子,通过进一步筛选,主要在免疫系统和信号通路如趋化因子、细胞因子和白细胞介素等生物学GO术语和通路中富集。
计算机数据分析方法表明,所确定的选定基因组合涵盖了引发这些疾病中炎症的广泛已知功能。