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大鼠ADAR2剪接变体的差异酶活性归因于脱氨酶结构域中与RNA相互作用能力的改变。

Differential Enzymatic Activity of Rat ADAR2 Splicing Variants Is Due to Altered Capability to Interact with RNA in the Deaminase Domain.

作者信息

Filippini Alice, Bonini Daniela, Giacopuzzi Edoardo, La Via Luca, Gangemi Fabrizio, Colombi Marina, Barbon Alessandro

机构信息

Division of Biology and Genetics-Department of Molecular and Translational Medicine, University of Brescia, Viale Europa 11, 25123 Brescia, Italy.

Division of Physics, Department of Molecular and Translational Medicine, University of Brescia, Viale Europa 11, 25123 Brescia, Italy.

出版信息

Genes (Basel). 2018 Feb 8;9(2):79. doi: 10.3390/genes9020079.

DOI:10.3390/genes9020079
PMID:29419780
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5852575/
Abstract

In mammals, adenosine (A) to inosine (I) RNA editing is performed by adenosine deaminases acting on RNA (ADAR), ADAR1 and ADAR2 enzymes, encoded by mRNAs that might undergo splicing process. In rat, two splicing events produce several isoforms of ADAR2, called ADAR2a, ADAR2b, ADAR2e, and ADAR2f, but only ADAR2a and ADAR2b are translated into an active protein. In particular, they differ for ten amino acids located in the catalytic domain of ADAR2b. Here, we focused on these two isoforms, analyzing the splicing pattern and their different function during rat neuronal maturation. We found an increase of editing levels in cortical neurons overexpressing ADAR2a compared to those overexpressing ADAR2b. These results indicate ADAR2a isoform as the most active one, as reported for the homologous human short variant. Furthermore, we showed that the differential editing activity is not due to a different dimerization of the two isoforms; it seems to be linked to the ten amino acids loop of ADAR2b that might interfere with RNA binding, occupying the space volume in which the RNA should be present in case of binding. These data might shed light on the complexity of ADAR2 regulations.

摘要

在哺乳动物中,腺苷(A)到肌苷(I)的RNA编辑由作用于RNA的腺苷脱氨酶(ADAR)、ADAR1和ADAR2酶执行,这些酶由可能经历剪接过程的mRNA编码。在大鼠中,两种剪接事件产生了几种ADAR2的异构体,称为ADAR2a、ADAR2b、ADAR2e和ADAR2f,但只有ADAR2a和ADAR2b被翻译成活性蛋白。特别是,它们在ADAR2b催化结构域中的十个氨基酸不同。在这里,我们聚焦于这两种异构体,分析了大鼠神经元成熟过程中的剪接模式及其不同功能。我们发现,与过表达ADAR2b的皮质神经元相比,过表达ADAR2a的皮质神经元的编辑水平有所增加。这些结果表明,ADAR2a异构体是最活跃的异构体,正如同源人类短变体的报道。此外,我们表明,差异编辑活性不是由于两种异构体的不同二聚化;它似乎与ADAR2b的十个氨基酸环有关,该环可能会干扰RNA结合,占据RNA结合时应存在的空间体积。这些数据可能有助于揭示ADAR2调控的复杂性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/6bcaf50d5ede/genes-09-00079-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/c09bc95b6c8f/genes-09-00079-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/feb72ea969c4/genes-09-00079-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/c774ca1bdbbd/genes-09-00079-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/ac6dcfd2f376/genes-09-00079-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/a1ed7a54ea84/genes-09-00079-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/91568ee7f8d4/genes-09-00079-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/0bb0496f3994/genes-09-00079-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/ea24048aaa29/genes-09-00079-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/6bcaf50d5ede/genes-09-00079-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/c09bc95b6c8f/genes-09-00079-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/feb72ea969c4/genes-09-00079-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/c774ca1bdbbd/genes-09-00079-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/ac6dcfd2f376/genes-09-00079-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/a1ed7a54ea84/genes-09-00079-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/91568ee7f8d4/genes-09-00079-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/0bb0496f3994/genes-09-00079-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/ea24048aaa29/genes-09-00079-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5532/5852575/6bcaf50d5ede/genes-09-00079-g009.jpg

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RNA Biol. 2017 Nov 2;14(11):1580-1591. doi: 10.1080/15476286.2017.1338232. Epub 2017 Sep 5.
3
Adenosine Deaminase That Acts on RNA 3 (ADAR3) Binding to Glutamate Receptor Subunit B Pre-mRNA Inhibits RNA Editing in Glioblastoma.
RNA. 2022 Oct;28(10):1281-1297. doi: 10.1261/rna.079266.122. Epub 2022 Jul 21.
4
A new strategy to increase RNA editing at the Q/R site of GluA2 AMPA receptor subunits by targeting alternative splicing patterns of ADAR2.通过靶向 ADAR2 的剪接模式增加 GluA2 AMPA 受体亚基 Q/R 位点 RNA 编辑的新策略。
J Neurosci Methods. 2021 Dec 1;364:109357. doi: 10.1016/j.jneumeth.2021.109357. Epub 2021 Sep 16.
5
RNA Editing and Modifications in Mood Disorders.心境障碍中的 RNA 编辑与修饰。
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6
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Biochim Biophys Acta Mol Cell Res. 2020 Oct;1867(10):118769. doi: 10.1016/j.bbamcr.2020.118769. Epub 2020 Jun 5.
7
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Am J Hum Genet. 2020 Apr 2;106(4):467-483. doi: 10.1016/j.ajhg.2020.02.015. Epub 2020 Mar 26.
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4
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5
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