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计算机预测癌症免疫原:现状。

In silico prediction of cancer immunogens: current state of the art.

机构信息

Faculty of Pharmacy, Medical University of Sofia, 2 Dunav st, 1000, Sofia, Bulgaria.

School of Life and Health Sciences, Aston University, Aston Triangle, Birmingham, B4 7ET, UK.

出版信息

BMC Immunol. 2018 Mar 15;19(1):11. doi: 10.1186/s12865-018-0248-x.

DOI:10.1186/s12865-018-0248-x
PMID:29544447
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5856276/
Abstract

Cancer kills 8 million annually worldwide. Although survival rates in prevalent cancers continue to increase, many cancers have no effective treatment, prompting the search for new and improved protocols. Immunotherapy is a new and exciting addition to the anti-cancer arsenal. The successful and accurate identification of aberrant host proteins acting as antigens for vaccination and immunotherapy is a key aspiration for both experimental and computational research. Here we describe key elements of in silico prediction, including databases of cancer antigens and bleeding-edge methodology for their prediction. We also highlight the role dendritic cell vaccines can play and how they can act as delivery mechanisms for epitope ensemble vaccines. Immunoinformatics can help streamline the discovery and utility of Cancer Immunogens.

摘要

癌症每年在全球导致 800 万人死亡。虽然常见癌症的存活率持续上升,但许多癌症仍缺乏有效治疗方法,促使人们寻求新的、改进的方案。免疫疗法是抗癌武器库中的一项新的令人兴奋的补充。成功和准确地识别作为疫苗接种和免疫治疗抗原的异常宿主蛋白是实验和计算研究的关键目标。在这里,我们描述了计算机预测的关键要素,包括癌症抗原数据库和用于其预测的最先进方法。我们还强调了树突状细胞疫苗可以发挥的作用,以及它们如何作为表位组合疫苗的递送机制。免疫信息学可以帮助简化癌症免疫原的发现和应用。

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In silico prediction of cancer immunogens: current state of the art.计算机预测癌症免疫原:现状。
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本文引用的文献

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Colorectal Cancer Mortality Rates in Adults Aged 20 to 54 Years in the United States, 1970-2014.1970 - 2014年美国20至54岁成年人的结直肠癌死亡率
JAMA. 2017 Aug 8;318(6):572-574. doi: 10.1001/jama.2017.7630.
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TIminer: NGS data mining pipeline for cancer immunology and immunotherapy.TIminer:用于癌症免疫和免疫治疗的 NGS 数据挖掘管道。
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Augmentation of cellular and humoral immune responses to HPV16 and HPV18 E6 and E7 antigens by VGX-3100.VGX-3100增强对人乳头瘤病毒16型和18型E6和E7抗原的细胞免疫和体液免疫反应。
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RNActive® Technology: Generation and Testing of Stable and Immunogenic mRNA Vaccines.RNActive®技术:稳定且具有免疫原性的mRNA疫苗的研发与测试
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NCCN Guidelines Insights: Prostate Cancer Early Detection, Version 2.2016.美国国立综合癌症网络(NCCN)指南解读:前列腺癌早期检测,2016年第2版
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