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一种罕见的溶菌酶晶体形式,使用来自微米级晶体的高度冗余的多个电子衍射数据集解决。

A Rare Lysozyme Crystal Form Solved Using Highly Redundant Multiple Electron Diffraction Datasets from Micron-Sized Crystals.

机构信息

Inorganic and Structural Chemistry, Department of Materials and Environmental Chemistry, Stockholm University, 106 91 Stockholm, Sweden.

Department of Biochemistry and Biophysics, Stockholm University, 106 91 Stockholm, Sweden.

出版信息

Structure. 2018 Apr 3;26(4):667-675.e3. doi: 10.1016/j.str.2018.02.015. Epub 2018 Mar 15.

Abstract

Recent developments of novel electron diffraction techniques have shown to be powerful for determination of atomic resolution structures from micron- and nano-sized crystals, too small to be studied by single-crystal X-ray diffraction. In this work, the structure of a rare lysozyme polymorph is solved and refined using continuous rotation MicroED data and standard X-ray crystallographic software. Data collection was performed on a standard 200 kV transmission electron microscope (TEM) using a highly sensitive detector with a short readout time. The data collection is fast (∼3 min per crystal), allowing multiple datasets to be rapidly collected from a large number of crystals. We show that merging data from 33 crystals significantly improves not only the data completeness, overall I/σ and the data redundancy, but also the quality of the final atomic model. This is extremely useful for electron beam-sensitive crystals of low symmetry or with a preferred orientation on the TEM grid.

摘要

新型电子衍射技术的最新发展表明,对于通过单晶 X 射线衍射难以研究的微米级和纳米级小晶体,其原子分辨率结构的测定也非常有效。在这项工作中,使用连续旋转 MicroED 数据和标准 X 射线晶体学软件解决并精修了一种稀有溶菌酶多晶型物的结构。使用具有短读出时间的高灵敏度探测器在标准 200kV 透射电子显微镜(TEM)上进行数据采集。数据采集速度很快(每个晶体约 3 分钟),可以从大量晶体中快速收集多个数据集。我们表明,来自 33 个晶体的数据的合并不仅显著提高了数据完整性、整体 I/σ 和数据冗余度,而且还提高了最终原子模型的质量。这对于电子束敏感的低对称性晶体或在 TEM 网格上具有择优取向的晶体非常有用。

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