Instituto Cajal, IC-CSIC, Avenida Doctor Arce 37, 28002 Madrid, Spain; Instituto Madrileño de Estudios Avanzados en Nanociencia, Cantoblanco, 28049 Madrid, Spain.
Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel.
J Biol Chem. 2018 May 11;293(19):7139-7147. doi: 10.1074/jbc.RA117.000644. Epub 2018 Mar 22.
Cellulosomes are bacterial protein complexes that bind and efficiently degrade lignocellulosic substrates. These are formed by multimodular scaffolding proteins known as scaffoldins, which comprise cohesin modules capable of binding dockerin-bearing enzymes and usually a carbohydrate-binding module that anchors the system to a substrate. It has been suggested that cellulosomes bound to the bacterial cell surface might be exposed to significant mechanical forces. Accordingly, the mechanical properties of these anchored cellulosomes may be important to understand and improve cellulosome function. Here we used single-molecule force spectroscopy to study the mechanical properties of selected cohesin modules from scaffoldins of different cellulosomes. We found that cohesins located in the region connecting the cell and the substrate are more robust than those located outside these two anchoring points. This observation applies to cohesins from primary scaffoldins ( those that directly bind dockerin-bearing enzymes) from different cellulosomes despite their sequence differences. Furthermore, we also found that cohesin nanomechanics (specifically, mechanostability and the position of the mechanical clamp of cohesin) are not significantly affected by other cellulosomal components, including linkers between cohesins, multiple cohesin repeats, and dockerin binding. Finally, we also found that cohesins (from both the connecting and external regions) have poor refolding efficiency but similar refolding rates, suggesting that the high mechanostability of connecting cohesins may be an evolutionarily conserved trait selected to minimize the occurrence of cohesin unfolding, which could irreversibly damage the cellulosome. We conclude that cohesin mechanostability is a major determinant of the overall mechanical stability of the cellulosome.
纤维小体是一种能够结合并有效降解木质纤维素底物的细菌蛋白复合物。这些复合物由多模块支架蛋白(称为支架蛋白)组成,其中包含能够结合含有 dockerin 的酶的黏合模块,通常还有一个碳水化合物结合模块,该模块将系统锚定到底物上。有人认为,结合在细菌细胞表面的纤维小体可能会受到很大的机械力。因此,这些固定纤维小体的机械性能对于理解和改善纤维小体功能可能很重要。在这里,我们使用单分子力谱法研究了来自不同纤维小体支架蛋白的选定黏合模块的机械性能。我们发现,位于细胞和底物之间连接区域的黏合模块比位于这两个锚固点之外的黏合模块更坚固。这一观察结果适用于来自不同纤维小体的主要支架蛋白(直接结合含有 dockerin 的酶的那些)中的黏合模块,尽管它们的序列存在差异。此外,我们还发现,黏合模块的纳米力学(特别是黏合模块的机械稳定性和机械夹具的位置)不受其他纤维小体成分的显著影响,包括黏合模块之间的接头、多个黏合模块重复序列和 dockerin 结合。最后,我们还发现,黏合模块(来自连接区域和外部区域)的重折叠效率都很差,但重折叠速率相似,这表明连接黏合模块的高机械稳定性可能是一种保守的进化特征,旨在最大限度地减少黏合模块展开的发生,因为这可能会不可逆地损坏纤维小体。我们的结论是,黏合模块的机械稳定性是纤维小体整体机械稳定性的主要决定因素。