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纳布勒突尼斯人群中17个X染色体STR基因座的遗传变异

Genetic variation of 17 X-chromosome STR loci in Tunisian population of Nabeul.

作者信息

Messoussi Monia, Prieto-Fernández Endika, Baeta Miriam, Núñez Carolina, Gaaied Amel Ben Ammar-El, de Pancorbo Marian M, Fadhlaoui-Zid Karima

机构信息

Laboratory of Genetics, Immunology, and Human Pathologies, Faculty of Science of Tunis, University Tunis El Manar, Tunis, Tunisia.

BIOMICs Research Group, Lascaray Research Center, University of the Basque Country UPV/EHU, Avda, Miguel de Unamuno, 3, 01006, Vitoria-Gasteiz, Spain.

出版信息

Int J Legal Med. 2019 Jan;133(1):85-88. doi: 10.1007/s00414-018-1827-3. Epub 2018 Mar 22.

Abstract

In the present study, the genetic variations of 17 X-STR markers (DXS8378, DXS9898, DXS7133, GATA31E08, GATA172D05, DXS6801, DXS7423, DXS6809, DXS6799, DXS7132, DXS9902, DXS6800, DXS6789, DXS10075, DXS10079, DXS6807, and DXS6803) were analyzed in 139 unrelated individuals in Nabeul, aiming to perform an X-STR database for anthropological and forensic purposes. Our results indicate that DXS6809 was the most polymorphic locus, whereas DXS6807 was the least informative marker. In addition, the obtained values for the statistical parameters of forensic interest, i.e., the power of discrimination in males (PD) and females (PD), as well as the mean exclusion chance in duos (MEC) and trios (MEC) have demonstrated that this panel of 17 X-STRs is highly informative and useful for forensic application and anthropological research. Additionally, pairwise genetic distances based on F were calculated between Nabeul population and other populations extracted from the literature. Genetic distances were represented in a non-metric MDS plot and clustering of populations according to their geographic locations and their historical relationship was detected.

摘要

在本研究中,对纳布尔地区139名无亲缘关系个体的17个X染色体短串联重复序列(X-STR)标记(DXS8378、DXS9898、DXS7133、GATA31E08、GATA172D05、DXS6801、DXS7423、DXS6809、DXS6799、DXS7132、DXS9902、DXS6800、DXS6789、DXS10075、DXS10079、DXS6807和DXS6803)的遗传变异进行了分析,旨在建立一个用于人类学和法医学目的的X-STR数据库。我们的结果表明,DXS6809是多态性最高的位点,而DXS6807是信息量最少的标记。此外,所获得的法医学相关统计参数值,即男性的鉴别力(PD)和女性的鉴别力(PD),以及双人组合(MEC)和三人组合(MEC)的平均排除机会,均表明这17个X-STR标记组合具有高度信息量,对法医学应用和人类学研究非常有用。此外,还计算了纳布尔人群与文献中提取的其他人群之间基于F的成对遗传距离。遗传距离以非度量多维尺度图表示,并根据地理位置和历史关系检测到人群聚类。

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