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揭示某些氟取代分子复合物中以氟为中心的非共价相互作用的影响因素:第一性原理研究的见解

Revealing Factors Influencing the Fluorine-Centered Non-Covalent Interactions in Some Fluorine-Substituted Molecular Complexes: Insights from First-Principles Studies.

作者信息

Varadwaj Arpita, Varadwaj Pradeep R, Marques Helder M, Yamashita Koichi

机构信息

Department of Chemical System Engineering, School of Engineering, The University of Tokyo 7-3-1, Hongo, Bunkyo-ku, Japan 113-8656, and CREST-JST, 7 Gobancho, Chiyoda-ku, Tokyo, Japan 102-0076.

Molecular Sciences Institute, School of Chemistry, University of the Witwatersrand, Johannesburg, 2050, South Africa.

出版信息

Chemphyschem. 2018 Jun 19;19(12):1486-1499. doi: 10.1002/cphc.201800023. Epub 2018 Apr 17.

DOI:10.1002/cphc.201800023
PMID:29569853
Abstract

We examine the equilibrium structure and properties of six fully or partially fluorinated hydrocarbons and several of their binary complexes using computational methods. In the monomers, the electrostatic surface of the fluorine is predicted to be either entirely negative or weakly positive. However, its lateral sites are always negative. This enables the fluorine to display an anisotropic distribution of charge density on its electrostatic surface. While this is the electrostatic surface scenario of the fluorine atom, its negative sites in some of these monomers are shown to have the potential to engage in attractive engagements with the negative site(s) on the same atom in another molecule of the same type, or a molecule of a different type, to form bimolecular complexes. This is revealed by analyzing the results of current state-of-the-art computational approaches such as DFT, together with those obtained from the quantum theory of atoms in molecules, molecular electrostatic surface potential and symmetry adapted perturbation theories. We demonstrate that the intermolecular interaction energy arising in part from the universal London dispersion, which has been underappreciated for decades, is an essential factor in explaining the attraction between the negative sites, although energy arising from polarization strengthens the extent of the intermolecular interactions in these complexes.

摘要

我们使用计算方法研究了六种全氟或部分氟化的碳氢化合物及其几种二元配合物的平衡结构和性质。在单体中,氟的静电表面预计要么完全为负,要么为弱正。然而,其侧面总是负的。这使得氟在其静电表面上呈现出电荷密度的各向异性分布。虽然这是氟原子的静电表面情况,但在其中一些单体中,其负位点被证明有可能与同一类型的另一个分子或不同类型的分子中同一原子上的负位点进行吸引性结合,以形成双分子配合物。通过分析当前最先进的计算方法(如密度泛函理论(DFT))的结果,以及从分子中的原子量子理论、分子静电表面势和对称适配微扰理论获得的结果,揭示了这一点。我们证明,部分源于普遍的伦敦色散力的分子间相互作用能,几十年来一直未得到充分重视,是解释负位点之间吸引力的一个重要因素,尽管极化产生的能量增强了这些配合物中分子间相互作用的程度。

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