Dipartimento di Ingegneria Industriale, Università di Roma Tor Vergata, via del Politecnico 1, 00133 Roma, Italy.
J Phys Condens Matter. 2018 May 23;30(20):204002. doi: 10.1088/1361-648X/aababe. Epub 2018 Mar 29.
Proteins perform a huge number of central functions in living organisms, thus all the new techniques allowing their precise, fast and accurate characterization at single-molecule level certainly represent a burst in proteomics with important biomedical impact. In this review, we describe the recent progresses in the developing of nanopore based devices for protein sequencing. We start with a critical analysis of the main technical requirements for nanopore protein sequencing, summarizing some ideas and methodologies that have recently appeared in the literature. In the last sections, we focus on the physical modelling of the transport phenomena occurring in nanopore based devices. The multiscale nature of the problem is discussed and, in this respect, some of the main possible computational approaches are illustrated.
蛋白质在生物体内执行着大量的核心功能,因此所有能够在单分子水平上对其进行精确、快速和准确表征的新技术,无疑代表了蛋白质组学领域的一个重大突破,具有重要的生物医学影响。在这篇综述中,我们描述了基于纳米孔的蛋白质测序设备的最新进展。我们首先对纳米孔蛋白质测序的主要技术要求进行了批判性分析,总结了最近文献中出现的一些思路和方法。在最后几节中,我们专注于基于纳米孔的设备中发生的输运现象的物理建模。讨论了问题的多尺度性质,并在这方面说明了一些主要的可能计算方法。