Department of Biomedical Engineering, Duke University, Durham, NC 27708.
Department of Biomedical Engineering, Duke University, Durham, NC 27708;
Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):4069-4074. doi: 10.1073/pnas.1719504115. Epub 2018 Apr 2.
It is widely acknowledged that faster-growing bacteria are killed faster by β-lactam antibiotics. This notion serves as the foundation for the concept of bacterial persistence: dormant bacterial cells that do not grow are phenotypically tolerant against β-lactam treatment. Such correlation has often been invoked in the mathematical modeling of bacterial responses to antibiotics. Due to the lack of thorough quantification, however, it is unclear whether and to what extent the bacterial growth rate can predict the lysis rate upon β-lactam treatment under diverse conditions. Enabled by experimental automation, here we measured >1,000 growth/killing curves for eight combinations of antibiotics and bacterial species and strains, including clinical isolates of bacterial pathogens. We found that the lysis rate of a bacterial population linearly depends on the instantaneous growth rate of the population, regardless of how the latter is modulated. We further demonstrate that this predictive power at the population level can be explained by accounting for bacterial responses to the antibiotic treatment by single cells. This linear dependence of the lysis rate on the growth rate represents a dynamic signature associated with each bacterium-antibiotic pair and serves as the quantitative foundation for designing combination antibiotic therapy and predicting the population-structure change in a population with mixed phenotypes.
人们普遍认为,生长较快的细菌会更快地被β-内酰胺类抗生素杀死。这一概念是细菌持续存在概念的基础:不生长的休眠细菌细胞在表型上对β-内酰胺类药物治疗具有耐受性。这种相关性在抗生素对细菌反应的数学建模中经常被引用。然而,由于缺乏彻底的量化,目前尚不清楚在不同条件下,细菌的生长速度是否以及在多大程度上可以预测β-内酰胺类药物治疗时的裂解率。通过实验自动化,我们在这里测量了 8 种抗生素和细菌种类和菌株组合的>1000 个生长/杀伤曲线,包括细菌病原体的临床分离株。我们发现,细菌群体的裂解率与群体的瞬时增长率呈线性关系,而与后者的调节方式无关。我们进一步证明,通过单个细胞对抗生素治疗的反应来解释群体水平的这种预测能力。裂解率与生长速率的这种线性关系代表了与每个细菌-抗生素对相关的动态特征,并为设计联合抗生素治疗和预测具有混合表型的群体中群体结构变化提供了定量基础。