Division of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.
Department of Pathology, Division of Neuropathology, University of Washington, Seattle, Washington 98104, USA.
Genes Dev. 2018 Apr 1;32(7-8):512-523. doi: 10.1101/gad.312157.118. Epub 2018 Apr 9.
Glioblastoma is the most frequently occurring and invariably fatal primary brain tumor in adults. The vast majority of glioblastomas is characterized by chromosomal copy number alterations, including gain of whole chromosome 7 and loss of whole chromosome 10. Gain of whole chromosome 7 is an early event in gliomagenesis that occurs in proneural-like precursor cells, which give rise to all isocitrate dehydrogenase (IDH) wild-type glioblastoma transcriptional subtypes. () is one gene on chromosome 7 known to drive gliomagenesis, but, given its location near the end of 7p, there are likely several other genes located along chromosome 7 that select for its increased whole-chromosome copy number within glioblastoma cells. To identify other potential genes that could select for gain of whole chromosome 7, we developed an unbiased bioinformatics approach that identified () as a gene whose expression correlated with gain of chromosome 7 and a more aggressive phenotype of the resulting glioma. High expression of in glioblastoma was associated with a proneural gene expression pattern and decreased overall survival in both human proneural and PDGF-driven mouse glioblastoma. Furthermore, overexpression promoted cellular proliferation and potentiated radioresistance. We also found enrichment of expression in recurrent human and mouse glioblastoma at first recurrence after radiotherapy. Overall, this study implicates as a chromosome 7-associated gene-level locus that promotes selection for gain of whole chromosome 7 and an aggressive phenotype in glioblastoma.
胶质母细胞瘤是成人中最常见且无法治愈的原发性脑肿瘤。绝大多数胶质母细胞瘤的特征是染色体拷贝数改变,包括整条 7 号染色体获得和整条 10 号染色体缺失。整条 7 号染色体获得是神经前体细胞中发生的胶质母细胞瘤发生的早期事件,这些细胞会产生所有异柠檬酸脱氢酶(IDH)野生型胶质母细胞瘤转录亚型。()是已知在染色体 7 上驱动胶质母细胞瘤发生的一个基因,但由于其位于 7p 末端附近,因此可能还有其他几个基因位于染色体 7 上,这些基因选择增加胶质母细胞瘤细胞中整条染色体 7 的拷贝数。为了鉴定可能选择获得整条染色体 7 的其他潜在基因,我们开发了一种无偏倚的生物信息学方法,鉴定()为一种基因,其表达与染色体 7 的获得以及由此产生的胶质瘤更具侵袭性表型相关。在胶质母细胞瘤中,高表达()与神经前体细胞基因表达模式相关,并降低人类神经前体细胞和 PDGF 驱动的小鼠胶质母细胞瘤的总生存期。此外,过表达()促进细胞增殖并增强放射抗性。我们还发现()在放射治疗后首次复发的人类和小鼠复发性胶质母细胞瘤中表达丰富。总体而言,这项研究表明()是一个与染色体 7 相关的基因水平基因座,可促进获得整条染色体 7 的选择,并促进胶质母细胞瘤的侵袭性表型。