Department of Civil and Environmental Engineering, Environmental Chemistry and Technology Program , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Department of Geoscience , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Environ Sci Technol. 2018 May 15;52(10):5691-5699. doi: 10.1021/acs.est.7b06574. Epub 2018 Apr 24.
Dissimilatory iron-reducing bacteria (DIRB) are known to use humic substances (HS) as electron shuttles for dissimilatory iron reduction (DIR) by transferring electrons to HS-quinone moieties, which in turn rapidly reduce Fe(III) oxides. However, the potential for HS to serve as a source of organic carbon (OC) that can donate electrons for DIR is unknown. We studied whether humic acids (HA) and humins (HM) recovered from peat soil by sodium pyrophosphate extraction could serve as both electron shuttles and electron donors for DIR by freshwater sediment microorganisms. Both HA and HM served as electron shuttles in cultures amended with glucose. However, only HA served as an electron donor for DIR. Metagenomes from HA-containing cultures had an overrepresentation of genes involved in polysaccharide and to a lesser extent aromatic compound degradation, suggesting complex OC metabolism. Genomic searches for the porin-cytochrome complex involved in DIR resulted in matches to Ignavibacterium/Melioribacter, DIRB capable of polymeric OC metabolism. These results indicate that such taxa may have played a role in both DIR and decomposition of complex OC. Our results suggest that decomposition of HS coupled to DIR and other anaerobic pathways could play an important role in soil and sediment OC metabolism.
异化铁还原菌 (DIRB) 已知可以利用腐殖物质 (HS) 作为电子穿梭体,通过将电子转移到 HS-醌部分来促进异化铁还原 (DIR),HS-醌部分反过来又能迅速还原 Fe(III)氧化物。然而,HS 是否可以作为有机碳 (OC) 的来源,为 DIR 提供电子,目前尚不清楚。我们研究了从泥炭土中用焦磷酸钠提取的腐殖酸 (HA) 和腐殖质 (HM) 是否可以被淡水沉积物微生物用作 DIR 的电子穿梭体和电子供体。HA 和 HM 在添加葡萄糖的培养物中都可以作为电子穿梭体。然而,只有 HA 可以作为 DIR 的电子供体。含有 HA 的培养物的宏基因组中与多糖降解有关的基因表达过度,在较小程度上与芳香族化合物降解有关,这表明存在复杂的 OC 代谢。针对参与 DIR 的孔蛋白-细胞色素复合物的基因组搜索结果与 Ignavibacterium/Melioribacter 相匹配,后者是能够进行聚合 OC 代谢的 DIRB。这些结果表明,此类分类群可能在 DIR 和复杂 OC 分解中发挥了作用。我们的研究结果表明,HS 的分解与 DIR 和其他厌氧途径的耦合可能在土壤和沉积物 OC 代谢中发挥重要作用。