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新属新种巨型海绵栖无萨尔瓦多氏菌的描述,一种从巨型矶海绵中分离出的γ-变形菌。

Description of Sansalvadorimonas verongulae gen. nov., sp. nov., a gammaproteobacterium isolated from the marine sponge Verongula gigantea.

作者信息

Goldberg Stacey R, Haltli Brad A, Correa Hebelin, Kerr Russell G

机构信息

Department of Biomedical Science, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada.

Nautilus Biosciences Canada Inc., Duffy Research Center, Charlottetown, Prince Edward Island, Canada.

出版信息

Int J Syst Evol Microbiol. 2018 Jun;68(6):2006-2014. doi: 10.1099/ijsem.0.002781. Epub 2018 Apr 24.

Abstract

A Gram-stain-negative, strictly aerobic, motile, rod-shaped bacterium, designated strain RKSG058, was isolated from the marine sponge Verongula gigantea, collected off the west coast of San Salvador, The Bahamas. Phylogenetic analyses based on 16S rRNA gene sequences revealed that RKSG058 formed a distinct lineage within the family Hahellaceae (order Oceanospirillales, class Gammaproteobacteria), and was most closely related to the genus Endozoicomonas, with sequence similarities to members of this genus ranging from 92.0 to 93.7 %. Optimal growth occurred at 30 °C, at pH 7 and in the presence of 2-3 % (w/v) NaCl. The predominant cellular fatty acids were summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and C16 : 0. The major and minor respiratory quinones were Q-9 and Q-8, respectively. The polar lipids comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, three unidentified aminolipids, an unidentified phospholipid and five unidentified lipids. The DNA G+C content was 42.3 mol%. Biochemical, chemotaxonomic and phylogenetic analyses indicated that strain RKSG058 represents the first cultured isolate of a novel bacterial genus and species within the family Hahellaceae, for which the name Sansalvadorimonas verongulae gen. nov., sp. nov. is proposed. The type strain of Sansalvadorimonas verongulae is RKSG058 (=TSD-72=LMG 29871). An emended description of the genus Kistimonas is provided.

摘要

从巴哈马圣萨尔瓦多西海岸采集的巨型矶海绵(Verongula gigantea)中分离出一株革兰氏染色阴性、严格需氧、具运动性的杆状细菌,命名为菌株RKSG058。基于16S rRNA基因序列的系统发育分析表明,RKSG058在海地狱菌科(Oceanospirillales目,γ-变形菌纲)内形成了一个独特的谱系,与内共生单胞菌属关系最为密切,与该属成员的序列相似性在92.0%至93.7%之间。最适生长温度为30 °C,pH值为7,NaCl浓度为2-3%(w/v)。主要的细胞脂肪酸为总和特征3(C16 : 1ω7c和/或C16 : 1ω6c)、总和特征8(C18 : 1ω7c和/或C18 : 1ω6c)和C16 : 0。主要和次要呼吸醌分别为Q-9和Q-8。极性脂质包括双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、三种未鉴定的氨基脂质、一种未鉴定的磷脂和五种未鉴定的脂质。DNA G+C含量为42.3 mol%。生化、化学分类和系统发育分析表明,菌株RKSG058代表海地狱菌科内一个新细菌属和种的首个培养分离株,为此提议命名为Verongulae新属及新种(Sansalvadorimonas verongulae gen. nov., sp. nov.)。Verongulae新属的模式菌株为RKSG058(=TSD-72=LMG 29871)。同时提供了对Kistimonas属的修订描述。

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