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新属,新种,一种从海洋海绵中分离得到的海洋细菌。

gen. nov., sp. nov., a marine bacterium isolated from the sea sponge .

机构信息

Department of Biomedical Science, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada.

Nautilus Biosciences Croda, Duffy Research Center, Charlottetown, Prince Edward Island, Canada.

出版信息

Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004873.

Abstract

A Gram-stain-negative, strictly aerobic, motile bacterium, designated strain RKSG073, was isolated from the sea sponge , collected off the west coast of San Salvador, The Bahamas. Cells were curved-to-spiral rods with single, bipolar (amphitrichous) flagella, oxidase- and catalase-positive, non-nitrate-reducing and required salt for growth. RKSG073 grew optimally at 30-37 °C, pH 6-7, and with 2-3 % (w/v) NaCl. The predominant fatty acids of RKSG073 were summed feature 8 (Cω6 and/or Cω7) and C. Major isoprenoid quinones were identified as Q-10 and Q-9. Phylogenetic analyses of nearly complete 16S rRNA genes and genome sequences positioned strain RKSG073 in a clade with its closest relative AH-MY2 (92.1 % 16S rRNA gene sequence similarity), which subsequently clustered with Gri0909, ZC80 and type species of the genera , and . The DNA G+C content calculated from the genome of RKSG073 was 42.2 mol%. On the basis of phylogenetic distinctiveness and polyphasic analysis, here we propose that RKSG073 (culture deposit numbers: ATCC collection = TSD-74, BCCM collection = LMG 29869) represents the type strain of a novel genus and species within the family , order and class , for which the name gen. nov., sp. nov. is proposed.

摘要

一株革兰氏阴性、严格需氧、能运动的细菌,被命名为 RKSG073 菌株,从巴哈马圣萨尔瓦多西海岸采集的海绵中分离得到。细胞呈弯曲螺旋状,具有单一的、两极(双端)的(周生的)鞭毛,氧化酶和过氧化氢酶阳性,不还原硝酸盐,生长需要盐。RKSG073 在 30-37°C、pH6-7 和 2-3%(w/v)NaCl 下生长最佳。RKSG073 的主要脂肪酸为 summed feature 8(Cω6 和/或 Cω7)和 C 16:1ω7c。主要的异戊二烯醌为 Q-10 和 Q-9。基于近全 16S rRNA 基因和基因组序列的系统发育分析,将 RKSG073 菌株定位于与最接近的亲缘菌株 AH-MY2(16S rRNA 基因序列相似性为 92.1%)的一个分支中,随后与 Gri0909、ZC80 和属的模式种 聚在一起。根据 RKSG073 基因组计算的 DNA G+C 含量为 42.2 mol%。基于系统发育的独特性和多相分析,我们建议 RKSG073(培养物保藏编号:ATCC 收藏=TSD-74,BCCM 收藏=LMG 29869)代表一个新属和种的模式菌株,属于 科、目 和纲,提议采用新属名和新种名 。

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