Department of Biomedical Science, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada.
Nautilus Biosciences Croda, Duffy Research Center, Charlottetown, Prince Edward Island, Canada.
Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004873.
A Gram-stain-negative, strictly aerobic, motile bacterium, designated strain RKSG073, was isolated from the sea sponge , collected off the west coast of San Salvador, The Bahamas. Cells were curved-to-spiral rods with single, bipolar (amphitrichous) flagella, oxidase- and catalase-positive, non-nitrate-reducing and required salt for growth. RKSG073 grew optimally at 30-37 °C, pH 6-7, and with 2-3 % (w/v) NaCl. The predominant fatty acids of RKSG073 were summed feature 8 (Cω6 and/or Cω7) and C. Major isoprenoid quinones were identified as Q-10 and Q-9. Phylogenetic analyses of nearly complete 16S rRNA genes and genome sequences positioned strain RKSG073 in a clade with its closest relative AH-MY2 (92.1 % 16S rRNA gene sequence similarity), which subsequently clustered with Gri0909, ZC80 and type species of the genera , and . The DNA G+C content calculated from the genome of RKSG073 was 42.2 mol%. On the basis of phylogenetic distinctiveness and polyphasic analysis, here we propose that RKSG073 (culture deposit numbers: ATCC collection = TSD-74, BCCM collection = LMG 29869) represents the type strain of a novel genus and species within the family , order and class , for which the name gen. nov., sp. nov. is proposed.
一株革兰氏阴性、严格需氧、能运动的细菌,被命名为 RKSG073 菌株,从巴哈马圣萨尔瓦多西海岸采集的海绵中分离得到。细胞呈弯曲螺旋状,具有单一的、两极(双端)的(周生的)鞭毛,氧化酶和过氧化氢酶阳性,不还原硝酸盐,生长需要盐。RKSG073 在 30-37°C、pH6-7 和 2-3%(w/v)NaCl 下生长最佳。RKSG073 的主要脂肪酸为 summed feature 8(Cω6 和/或 Cω7)和 C 16:1ω7c。主要的异戊二烯醌为 Q-10 和 Q-9。基于近全 16S rRNA 基因和基因组序列的系统发育分析,将 RKSG073 菌株定位于与最接近的亲缘菌株 AH-MY2(16S rRNA 基因序列相似性为 92.1%)的一个分支中,随后与 Gri0909、ZC80 和属的模式种 聚在一起。根据 RKSG073 基因组计算的 DNA G+C 含量为 42.2 mol%。基于系统发育的独特性和多相分析,我们建议 RKSG073(培养物保藏编号:ATCC 收藏=TSD-74,BCCM 收藏=LMG 29869)代表一个新属和种的模式菌株,属于 科、目 和纲,提议采用新属名和新种名 。