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黄褐双杆菌新种和土栖双杆菌新种,从森林土壤中分离出的噬纤维菌科两个新成员。

Dyadobacter flavus sp. nov. and Dyadobacter terricola sp. nov., two novel members of the family Cytophagaceae isolated from forest soil.

作者信息

Dahal Ram Hari, Kim Jaisoo

机构信息

Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do, 16227, South Korea.

出版信息

Arch Microbiol. 2018 Sep;200(7):1067-1074. doi: 10.1007/s00203-018-1521-3. Epub 2018 May 8.

Abstract

Two strains of bacteria designated strains S-53 and A27 were isolated from forest soil and subjected to polyphasic characterization. Cells were aerobic, Gram-staining-negative, catalase- and oxidase- positive, non-motile, non-spore-forming, rod-shaped, and yellow-pigmented. Flexirubin-type pigments were present. Both strains were positive for PNPG, hydrolysed casein, and tyrosine. A phylogenetic analysis based on its 16S rRNA gene sequence revealed that strains S-53 and A27 formed a lineage within the family Cytophagaceae that were distinct from various members of the genus Dyadobacter (98.9-93.2% sequence similarity). Closest member for strain S-53 was Dyadobacter jejuensis AM1R11 (95.7%) and for A27 Dyadobacter endophyticus 65 (98.9%). The predominant respiratory quinone was MK-7 for both strains. The major polar lipid for both strains was phosphatidylethanolamine. The major cellular fatty acids for both strains were summed feature 3 (Cω7c and/or Cω6c), iso-C, Cω5c, and C. The DNA G+C content of strains ranges from 46.5 to 48.7 mol%. On the basis of phenotypic, genotypic, chemotaxonomic, and phylogenetic analysis, both strains S-53 and A27 represent a novel member in the genus Dyadobacter, for which the name Dyadobacter flavus sp. nov. and Dyadobacter terricola sp. nov. are proposed, respectively. The type strain of D. flavus is S-53 (= KEMB 9005-541 = KACC 19149 = NBRC 112681) and type strain of D. terricola is A27 (= KEMB 9005-524 = KACC 19147 = NBRC 112680).

摘要

从森林土壤中分离出两株细菌,分别命名为S-53菌株和A27菌株,并对其进行了多相表征。细胞为需氧型,革兰氏染色阴性,过氧化氢酶和氧化酶阳性,无运动性,不形成芽孢,杆状,且带有黄色色素。存在Flexirubin型色素。两株菌对PNPG、水解酪蛋白和酪氨酸均呈阳性反应。基于其16S rRNA基因序列的系统发育分析表明,S-53菌株和A27菌株在噬纤维菌科内形成了一个分支,与Dyadobacter属的各个成员不同(序列相似性为98.9 - 93.2%)。S-53菌株最接近的成员是济州岛Dyadobacter jejuensis AM1R11(95.7%),A27菌株最接近的成员是内生Dyadobacter endophyticus 65(98.9%)。两株菌的主要呼吸醌均为MK-7。两株菌的主要极性脂均为磷脂酰乙醇胺。两株菌的主要细胞脂肪酸均为总和特征3(Cω7c和/或Cω6c)、异-C、Cω5c和C。菌株的DNA G+C含量范围为46.5至48.7 mol%。基于表型、基因型、化学分类和系统发育分析,S-53菌株和A27菌株均代表Dyadobacter属的一个新成员,分别提议将其命名为黄Dyadobacter flavus sp. nov.和土生Dyadobacter terricola sp. nov.。黄Dyadobacter flavus的模式菌株为S-53(= KEMB 9005-541 = KACC 19149 = NBRC 112681),土生Dyadobacter terricola的模式菌株为A27(= KEMB 9005-524 = KACC 19147 = NBRC 112680)。

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