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牙周病原体的多重实时聚合酶链反应检测及相对定量分析

Multiplex real-time PCR detection and relative quantification of periodontal pathogens.

作者信息

Coffey Joshua, Choudhry Mydah, Shlossman Marc, Makin Inder Raj S, Singh Vineet K

机构信息

Missouri School of Dentistry and Oral Health Missouri USA.

Kirksville College of Osteopathic Medicine Missouri USA.

出版信息

Clin Exp Dent Res. 2016 Aug 11;2(3):185-192. doi: 10.1002/cre2.37. eCollection 2016 Dec.

DOI:10.1002/cre2.37
PMID:29744166
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5839218/
Abstract

Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real-time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detection and relative quantification of the following five bacterial species relevant to periodontal diseases: , , , , and . The conserved regions of the genome of these species were targeted with oligos and TaqMan probes in real-time PCR assays. The species-specific TaqMan oligos and TaqMan probes showed no cross-amplification, and there was no loss of amplification yield in multiplex real-time PCR assays. All five bacterial targets were amplified analogous to the template concentrations used in these assays. This multiplex real-time PCR strategy could potentially be used to detect the bacterial species in periodontal pockets of patients with periodontal diseases. This assay may also serve as a quick tool for profiling and quantifying bacteria relevant to periodontal diseases and likely be a valuable tool for clinical translational research.

摘要

牙周炎是一种慢性炎症性疾病,与某些病原菌密切相关。本研究的目的是开发一种实时多重聚合酶链反应(PCR)检测方法,以检测和定量与牙周炎相关的细菌种类。我们针对以下五种与牙周疾病相关的细菌种类进行检测和相对定量: 、 、 、 、和 。在实时PCR检测中,用寡核苷酸和TaqMan探针靶向这些物种基因组的保守区域。物种特异性TaqMan寡核苷酸和TaqMan探针未显示交叉扩增,在多重实时PCR检测中也没有扩增产量损失。所有五个细菌靶点的扩增情况与这些检测中使用的模板浓度相似。这种多重实时PCR策略有可能用于检测牙周疾病患者牙周袋中的细菌种类。该检测方法也可作为一种快速工具,用于分析和定量与牙周疾病相关的细菌,可能是临床转化研究的一个有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/ffd950a16978/CRE2-2-185-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/b471e91975d4/CRE2-2-185-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/5cf40e46aeeb/CRE2-2-185-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/ffd950a16978/CRE2-2-185-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/b471e91975d4/CRE2-2-185-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/5cf40e46aeeb/CRE2-2-185-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3beb/5839218/ffd950a16978/CRE2-2-185-g003.jpg

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Subgingival bacterial clusters and serum antibody response as markers of extent and severity of periodontitis in adult Chinese.
Eur J Oral Sci. 2016 Apr;124(2):179-87. doi: 10.1111/eos.12256. Epub 2016 Feb 25.
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Virulence of Aggregatibacter actinomycetemcomitans serotypes and DGGE subtypes isolated from chronic adult periodontitis in Thailand.从泰国慢性成人牙周炎患者中分离出的伴放线聚集杆菌血清型和变性梯度凝胶电泳(DGGE)亚型的毒力
牙周分子诊断学:知识现状与临床应用的未来前景
Int J Mol Sci. 2024 Nov 25;25(23):12624. doi: 10.3390/ijms252312624.
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Real-Time PCR Method as Diagnostic Tool for Detection of Periodontal Pathogens in Patients with Periodontitis.实时 PCR 方法作为牙周炎患者牙周病病原体检测的诊断工具。
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