Suppr超能文献

嗜盐格氏菌新种,从海水中分离得到。

Gramella salexigens sp. nov., isolated from seawater.

作者信息

Shin Su-Kyoung, Kim Eunji, Yi Hana

机构信息

Institute for Biomaterials, Korea University, Seoul, Republic of Korea.

Department of Public Health Sciences, Graduate School, Korea University, Seoul, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2018 Jul;68(7):2381-2385. doi: 10.1099/ijsem.0.002850. Epub 2018 May 31.

Abstract

A Gram-stain-negative, rod-shaped, aerobic bacterial strain, designated LPB0144 was isolated from the seawater of South Sea, Korea. The 16S rRNA gene sequence was found to share the highest sequence similarity to Gramella sediminilitoris GHTF-27 (97.7 %) and the strain branched within the radiation of the genus Gramella in phylogenetic trees. Thus, the taxonomic position of the novel isolate was investigated using a polyphasic approach and complete genome sequencing. Strain LPB0144 has a circular chromosome of 2.98 Mb with DNA G+C content of 38.2 mol%. The genome includes 2604 protein-coding genes and three copies of rRNA operons. The detected respiratory quinone (MK-6) and the major polar lipid (phosphatidylethanolamine) resemble the chemotaxonomic profile of other Gramella species. The major cellular fatty acid profile (iso-C15 : 0, iso-C16 : 0, iso-C17 : 0 3-OH and anteiso-C15 : 0) is also within the range of Gramella, but detailed composition and amounts were found to be different from those of closely related neighbours. Many biochemical and physiological characteristics also distinguished the isolate from other species within the genus Gramella. On the basis of polyphasic taxonomic data obtained here, we propose strain LPB0144 as a novel Gramella species, for which the name Gramella salexigens sp. nov. is proposed. The type strain is LPB0144 (=KACC 18894=JCM 31560).

摘要

从韩国南海海水中分离出一株革兰氏阴性、杆状、需氧细菌菌株,命名为LPB0144。发现其16S rRNA基因序列与沉积物海杆菌GHTF-27的序列相似性最高(97.7%),且该菌株在系统发育树中位于海杆菌属的分支内。因此,采用多相分类法并通过全基因组测序对该新分离菌株的分类地位进行了研究。菌株LPB0144有一条2.98 Mb的环状染色体,DNA G+C含量为38.2 mol%。该基因组包含2604个蛋白质编码基因和三个rRNA操纵子拷贝。检测到的呼吸醌(MK-6)和主要极性脂质(磷脂酰乙醇胺)与其他海杆菌属物种的化学分类特征相似。主要细胞脂肪酸谱(异-C15 : 0、异-C16 : 0、异-C17 : 0 3-OH和anteiso-C15 : 0)也在海杆菌属范围内,但详细组成和含量与密切相关的近缘种不同。许多生化和生理特征也使该分离株与海杆菌属内的其他物种区分开来。基于此处获得的多相分类数据,我们提议将菌株LPB0144作为一个新的海杆菌属物种,命名为嗜盐海杆菌新种(Gramella salexigens sp. nov.)。模式菌株为LPB0144(=KACC 18894=JCM 31560)。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验