Suppr超能文献

新型阴沟肠杆菌亚马逊菌株的基因组序列草图,该菌株是一种来自巴西亚马逊州一条受污染溪流的高度耐重金属细菌。

Draft Genome Sequence of the Novel Enterobacter cloacae Strain amazonensis, a Highly Heavy Metal-Resistant Bacterium from a Contaminated Stream in Amazonas, Brazil.

作者信息

Astolfi Maria Clara Tavares, Carvalho Elen Bethleen de Souza, de Barros Adriane Menezes, Pinto Marcelo Valente, de Lacerda Luna Barrôco, Nogueira Viviane Brito, Lopes Eraldo Ferreira, Astolfi-Filho Spartaco

机构信息

DNA Technology Laboratory, Multidisciplinary Support Center, Federal University of Amazonas, Amazonas, Brazil.

DNA Technology Laboratory, Multidisciplinary Support Center, Federal University of Amazonas, Amazonas, Brazil

出版信息

Genome Announc. 2018 May 31;6(22):e00450-18. doi: 10.1128/genomeA.00450-18.

Abstract

Here, we report the draft genome of the strain amazonensis, a bacterium highly resistant to mercury that was isolated from a metal- and sewage-contaminated stream in Amazonas, Brazil. The exploration of the 5.0-Mb genome revealed 104 genes encoding resistance to toxic compounds and heavy metals, highlighting the potential biotechnological applications of this strain.

摘要

在此,我们报告了亚马逊菌株的基因组草图,该菌株是一种对汞具有高度抗性的细菌,从巴西亚马逊州一条受金属和污水污染的溪流中分离得到。对这个5.0兆碱基的基因组进行探索后发现,有104个基因编码对有毒化合物和重金属的抗性,凸显了该菌株潜在的生物技术应用价值。

相似文献

2
Draft genome sequence of an aminoglycoside-resistant RmtD2-producing Enterobacter cloacae subsp. cloacae ST395 in Brazil.
J Glob Antimicrob Resist. 2017 Sep;10:308-309. doi: 10.1016/j.jgar.2017.07.012. Epub 2017 Jul 27.
3
Draft Genome Sequence of Enterobacter ludwigii NCR3, a Heavy Metal-Resistant Rhizobacterium.
Genome Announc. 2016 Oct 6;4(5):e01076-16. doi: 10.1128/genomeA.01076-16.
4
Draft genome sequence of Enterobacter cloacae HBY, a ST128 clinical strain co-producing KPC-2 and NDM-1 carbapenemases.
J Glob Antimicrob Resist. 2018 Mar;12:1-2. doi: 10.1016/j.jgar.2017.10.022. Epub 2017 Nov 6.
6
High quality draft genome sequence of the heavy metal resistant bacterium Halomonas zincidurans type strain B6(T).
Stand Genomic Sci. 2014 Dec 29;9:30. doi: 10.1186/1944-3277-9-30. eCollection 2014.
8
Draft genome sequence data of a tigecycline-resistant ST93 clinical strain isolated from bloodstream infection.
Data Brief. 2018 Oct 5;21:414-418. doi: 10.1016/j.dib.2018.10.004. eCollection 2018 Dec.
9
Draft genome sequence of Enterobacter cloacae ST520 harbouring bla, bla and bla isolated from coastal waters of the South Atlantic Ocean.
J Glob Antimicrob Resist. 2017 Sep;10:279-280. doi: 10.1016/j.jgar.2017.07.017. Epub 2017 Aug 4.

引用本文的文献

1
Emergence of a Novel Lineage and Wide Spread of a /IncHI2/ST1 Plasmid among Nosocomial in Guadeloupe.
Antibiotics (Basel). 2022 Oct 20;11(10):1443. doi: 10.3390/antibiotics11101443.
2
Draft Genome Sequence of Heavy Metal-Resistant Bacillus cereus NWUAB01.
Microbiol Resour Announc. 2019 Feb 14;8(7). doi: 10.1128/MRA.01706-18. eCollection 2019 Feb.

本文引用的文献

1
Enterobacter aerogenes and Enterobacter cloacae; versatile bacterial pathogens confronting antibiotic treatment.
Front Microbiol. 2015 May 18;6:392. doi: 10.3389/fmicb.2015.00392. eCollection 2015.
2
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
3
Prokka: rapid prokaryotic genome annotation.
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
4
Complete genome sequence of Enterobacter cloacae subsp. cloacae type strain ATCC 13047.
J Bacteriol. 2010 May;192(9):2463-4. doi: 10.1128/JB.00067-10. Epub 2010 Mar 5.
5
Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community.
ISME J. 2010 May;4(5):660-72. doi: 10.1038/ismej.2009.154. Epub 2010 Feb 25.
6
Genomic diversity within the Enterobacter cloacae complex.
PLoS One. 2008 Aug 21;3(8):e3018. doi: 10.1371/journal.pone.0003018.
7
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.
8
The RAST Server: rapid annotations using subsystems technology.
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
9
Comparative genomics of regulation of heavy metal resistance in Eubacteria.
BMC Microbiol. 2006 Jun 5;6:49. doi: 10.1186/1471-2180-6-49.
10
CAP3: A DNA sequence assembly program.
Genome Res. 1999 Sep;9(9):868-77. doi: 10.1101/gr.9.9.868.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验