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单细胞中氧化还原依赖性异质性的时间特征分析。

Temporal profiling of redox-dependent heterogeneity in single cells.

机构信息

Department of Biological Chemistry, The Alexander Silberman Institute of Life Sciences, Safra Campus Givat Ram, The Hebrew University of Jerusalem, Jerusalem, Israel.

Proteomics and Mass Spectrometry Unit, The Alexander Silberman Institute of Life Sciences, Safra Campus Givat Ram, The Hebrew University of Jerusalem, Jerusalem, Israel.

出版信息

Elife. 2018 Jun 5;7:e37623. doi: 10.7554/eLife.37623.

Abstract

Cellular redox status affects diverse cellular functions, including proliferation, protein homeostasis, and aging. Thus, individual differences in redox status can give rise to distinct sub-populations even among cells with identical genetic backgrounds. Here, we have created a novel methodology to track redox status at single cell resolution using the redox-sensitive probe Grx1-roGFP2. Our method allows identification and sorting of sub-populations with different oxidation levels in either the cytosol, mitochondria or peroxisomes. Using this approach, we defined a redox-dependent heterogeneity of yeast cells and characterized growth, as well as proteomic and transcriptomic profiles of distinctive redox subpopulations. We report that, starting in late logarithmic growth, cells of the same age have a bi-modal distribution of oxidation status. A comparative proteomic analysis between these populations identified three key proteins, Hsp30, Dhh1, and Pnc1, which affect basal oxidation levels and may serve as first line of defense proteins in redox homeostasis.

摘要

细胞氧化还原状态影响多种细胞功能,包括增殖、蛋白质稳态和衰老。因此,即使在具有相同遗传背景的细胞中,氧化还原状态的个体差异也会导致不同的亚群出现。在这里,我们使用氧化还原敏感探针 Grx1-roGFP2 开发了一种新的方法,可以在单细胞分辨率下跟踪氧化还原状态。我们的方法允许在细胞质、线粒体或过氧化物酶体中识别和分选具有不同氧化水平的亚群。使用这种方法,我们定义了酵母细胞的氧化还原依赖性异质性,并对不同氧化还原亚群的生长以及蛋白质组学和转录组学特征进行了描述。我们报告说,从对数生长期后期开始,相同年龄的细胞的氧化状态呈双峰分布。对这些群体之间的比较蛋白质组学分析鉴定出三种关键蛋白,Hsp30、Dhh1 和 Pnc1,它们影响基础氧化水平,并且可能作为氧化还原平衡的第一道防御蛋白。

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