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使用分子克隆的病毒DNA探针通过斑点杂交法检测肠道腺病毒

Detection of enteric adenoviruses by dot-blot hybridization using a molecularly cloned viral DNA probe.

作者信息

Takiff H E, Seidlin M, Krause P, Rooney J, Brandt C, Rodriguez W, Yolken R, Straus S E

出版信息

J Med Virol. 1985 Jun;16(2):107-18. doi: 10.1002/jmv.1890160203.

DOI:10.1002/jmv.1890160203
PMID:2989418
Abstract

Enteric adenoviruses (EAds) (candidate adenoviruses 40 and 41, subgroups F and G) have been implicated in the etiology of gastroenteritis in infants, but their clinical significance has been unclear because a rapid test to distinguish these agents from other adenovirus (Ad) types has not been available. We developed a dot-blot hybridization assay for EAd DNA using a cloned DNA fragment that has little homology to non-EAd DNAs. The dot-blot system detected less than 20 pg of EAd DNA, while showing minimal cross hybridization to representative strains from all other Ad groups. There was no detectable hybridization to extracts of samples known to contain other enteric viruses. It was further shown that low levels of EAds in specimens could be amplified by culturing for 1 day in 293 cells. Stool samples and tissue culture lysates prescreened by electron microscopy, cell culture or ELISA were tested in a blind fashion. Using endonuclease analysis as the standard for typing the isolates, we found the dot-blot system to have a 91% sensitivity and 71% specificity for detecting EAds and distinguishing them from other Ads. False-positive and equivocal dot-blot results appeared to be caused by other Ads.

摘要

肠道腺病毒(EAds)(候选腺病毒40型和41型,F和G亚组)被认为与婴儿肠胃炎的病因有关,但由于缺乏一种能将这些病原体与其他腺病毒(Ad)类型区分开来的快速检测方法,其临床意义一直不明确。我们利用一个与非EAd DNA几乎没有同源性的克隆DNA片段,开发了一种用于检测EAd DNA的斑点杂交试验。该斑点杂交系统能检测到少于20 pg的EAd DNA,同时与所有其他Ad组的代表性菌株的交叉杂交最少。与已知含有其他肠道病毒的样本提取物没有可检测到的杂交。进一步研究表明,通过在293细胞中培养1天,可以扩增标本中低水平的EAds。对经电子显微镜、细胞培养或ELISA预筛选的粪便样本和组织培养裂解物进行盲法检测。以核酸内切酶分析作为分型分离株的标准,我们发现斑点杂交系统检测EAds并将其与其他Ads区分开来的灵敏度为91%,特异性为71%。假阳性和模糊的斑点杂交结果似乎是由其他Ads引起的。

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New methods for the diagnosis of enteric infections.肠道感染的新诊断方法。
World J Microbiol Biotechnol. 1991 Mar;7(2):150-6. doi: 10.1007/BF00328984.
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Detection of enteric adenoviruses with synthetic oligonucleotide probes.用合成寡核苷酸探针检测肠道腺病毒
J Med Virol. 1993 Dec;41(4):328-37. doi: 10.1002/jmv.1890410414.
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Direct detection and differentiation of fastidious and nonfastidious adenoviruses in stools by using a specific nonradioactive probe.使用特异性非放射性探针直接检测和区分粪便中苛养型和非苛养型腺病毒。
J Clin Microbiol. 1986 Nov;24(5):785-9. doi: 10.1128/jcm.24.5.785-789.1986.
5
DNA probes for clinical applications. Patents and literature.用于临床应用的DNA探针。专利与文献。
Appl Biochem Biotechnol. 1986 Jun;12(3):301-10. doi: 10.1007/BF02798426.
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Some advances in the diagnosis of respiratory virus infections.呼吸道病毒感染诊断方面的一些进展。
J R Coll Physicians Lond. 1987 Jul;21(3):210-3.
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DNA hybridization for diagnosis of enteric adenovirus infection from directly spotted human fecal specimens.通过直接点样的人类粪便标本进行DNA杂交以诊断肠道腺病毒感染。
J Clin Microbiol. 1987 Oct;25(10):1881-5. doi: 10.1128/jcm.25.10.1881-1885.1987.
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